| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
Click here to switch to the map view.
The map label for this gene is aslB [H]
Identifier: 91213320
GI number: 91213320
Start: 4242922
End: 4244187
Strand: Direct
Name: aslB [H]
Synonym: UTI89_C4358
Alternate gene names: 91213320
Gene position: 4242922-4244187 (Clockwise)
Preceding gene: 91213319
Following gene: 91213322
Centisome position: 83.76
GC content: 51.34
Gene sequence:
>1266_bases TTGAAGGATGACTTCAGGCAAGGAGCGACCATGCAGCAACAGGTTCCAACGCGTGCTTTTCATGTGATGGCGAAACCGAG CGGTTCTGATTGTAATCTGAACTGTGACTACTGTTTTTATCTCGAAAAACAATCCCTTTACCACGAAAAGCCAGTCACGC ATATGGACGATGACACGCTGGAAGCGTATGTCCGTCACTATATCGCTGCCAGCGAAACCCAAAACGAAGTGGCTTTTACC TGGCAGGGCGGCGAACCAACGTTACTCGGGCTGGATTTTTACCGCCGTGCCGTGGCGCTACAGGCGAAATATGGTGCTGG CAGGAAGATAAGTAATAGCTTCCAGACTAACGGCGTGCTGCTCGATGACGAATGGTGTGCATTTCTGGCAGAAAATCATT TTCTTGTAGGGTTATCGCTGGATGGTCCGGCTGAGATCCACAATCAATATCGCGTGACCAAAGGTGGCAGACCAACGCAT AAGCTGGTGATGCGTGCTCTGACGCTCCTGCAAAAACATCATGTCGACTATAACGTGCTGGTCTGCGTCAATCGCACCAG TGCGTTACAACCTTTGCAAGTCTATGATTTTCTGTGTGATGCAGGTGTTGAGTTCATCCAGTTTATTCCGGTGGTCGAGC GCCTGGCTGATGAAACGGCTGCTCATGCTGGACTTAAGCTACATGCTCCCGGCGATATTCAGGGCGAACTGACGGAATGG TCGGTGTGCCCGCAAGAGTTCGGTGAGTTTCTGGTGGCGATTTTCGACCACTGGATTAAGCGCGACGTCGGCAAGGTTTT CGTAATGAATATCGAATGGGCGTTCGCCAATTTTGTCGGCGCACCGGGCGCGGTTTGCCATCATCAGCCAACCTGTGGGC GCTCGGTGATTGTTGAACACAACGGCGATGTTTACGCCTGCGATCACTATGTTTATCCGCAGTATCGACTAGGGAATATG CTTCAGCAGACGATTGCAGAAATGATTGATTCCCCGCAACAGCAGGCATTTGGTGAAGATAAATTCAAGCAGTTACCGGC ACAGTGTCGCAGTTGCAACGTGTTAAAAGCGTGCTGGGGAGGCTGCCCGAAACACCGCTTTATGCTCGATGCCAGCGGCA AACCCGGGCTGAATTATTTGTGTGCCGGGTATCAGCGTTATTTCCGCCATCTACCGCCATATCTTAAAGCAATGGCTGAT TTGCTGGCGCACGGTCGTCCGGCCAGCGACATTATGCAGGCGCATTTGATGGTGGTGAATAAGTAG
Upstream 100 bases:
>100_bases CGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACTTTCCCTTCGCAATAAACGCCCGTAATAACGTATTGCGCCACGGT ATGATTTCGCCCTTAACTTA
Downstream 100 bases:
>100_bases AAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAATCATTGCAAATTCAATAA ATTGCAGCGTTCTGTAGGCT
Product: putative arylsulfatase regulatory protein
Products: NA
Alternate protein names: AnSME homolog [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKDDFRQGATMQQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYHEKPVTHMDDDTLEAYVRHYIAASETQNEVAFT WQGGEPTLLGLDFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTH KLVMRALTLLQKHHVDYNVLVCVNRTSALQPLQVYDFLCDAGVEFIQFIPVVERLADETAAHAGLKLHAPGDIQGELTEW SVCPQEFGEFLVAIFDHWIKRDVGKVFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNM LQQTIAEMIDSPQQQAFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMAD LLAHGRPASDIMQAHLMVVNK
Sequences:
>Translated_421_residues MKDDFRQGATMQQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYHEKPVTHMDDDTLEAYVRHYIAASETQNEVAFT WQGGEPTLLGLDFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTH KLVMRALTLLQKHHVDYNVLVCVNRTSALQPLQVYDFLCDAGVEFIQFIPVVERLADETAAHAGLKLHAPGDIQGELTEW SVCPQEFGEFLVAIFDHWIKRDVGKVFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNM LQQTIAEMIDSPQQQAFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMAD LLAHGRPASDIMQAHLMVVNK >Mature_421_residues MKDDFRQGATMQQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYHEKPVTHMDDDTLEAYVRHYIAASETQNEVAFT WQGGEPTLLGLDFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTH KLVMRALTLLQKHHVDYNVLVCVNRTSALQPLQVYDFLCDAGVEFIQFIPVVERLADETAAHAGLKLHAPGDIQGELTEW SVCPQEFGEFLVAIFDHWIKRDVGKVFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNM LQQTIAEMIDSPQQQAFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMAD LLAHGRPASDIMQAHLMVVNK
Specific function: Potential Positive Factor For The Regulation Of Arylsulfatase. [C]
COG id: COG0641
COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI48994973, Length=411, Percent_Identity=95.8637469586375, Blast_Score=826, Evalue=0.0, Organism=Escherichia coli, GI87081923, Length=393, Percent_Identity=41.4758269720102, Blast_Score=331, Evalue=5e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 47495; Mature: 47495
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDDFRQGATMQQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYHEKPVTHMDDDTL CCCCHHCCCCHHHHCCCHHEEEEECCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCHHH EAYVRHYIAASETQNEVAFTWQGGEPTLLGLDFYRRAVALQAKYGAGRKISNSFQTNGVL HHHHHHHHHHCCCCCCEEEEEECCCCEEECHHHHHHHHHHEECCCCCCCCCCCCCCCCEE LDDEWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLLQKHHVDYNVL ECCHHHHHHHCCEEEEEEECCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCEEEE VCVNRTSALQPLQVYDFLCDAGVEFIQFIPVVERLADETAAHAGLKLHAPGDIQGELTEW EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHH SVCPQEFGEFLVAIFDHWIKRDVGKVFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEH CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEEE NGDVYACDHYVYPQYRLGNMLQQTIAEMIDSPQQQAFGEDKFKQLPAQCRSCNVLKACWG CCCEEEECCEECCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHC GCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASDIMQAHLMVVN CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHEEC K C >Mature Secondary Structure MKDDFRQGATMQQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYHEKPVTHMDDDTL CCCCHHCCCCHHHHCCCHHEEEEECCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCHHH EAYVRHYIAASETQNEVAFTWQGGEPTLLGLDFYRRAVALQAKYGAGRKISNSFQTNGVL HHHHHHHHHHCCCCCCEEEEEECCCCEEECHHHHHHHHHHEECCCCCCCCCCCCCCCCEE LDDEWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLLQKHHVDYNVL ECCHHHHHHHCCEEEEEEECCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCEEEE VCVNRTSALQPLQVYDFLCDAGVEFIQFIPVVERLADETAAHAGLKLHAPGDIQGELTEW EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHH SVCPQEFGEFLVAIFDHWIKRDVGKVFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEH CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEEE NGDVYACDHYVYPQYRLGNMLQQTIAEMIDSPQQQAFGEDKFKQLPAQCRSCNVLKACWG CCCEEEECCEECCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHC GCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASDIMQAHLMVVN CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHEEC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503; 11222759 [H]