| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yhjU [H]
Identifier: 91213044
GI number: 91213044
Start: 3964833
End: 3966512
Strand: Direct
Name: yhjU [H]
Synonym: UTI89_C4070
Alternate gene names: 91213044
Gene position: 3964833-3966512 (Clockwise)
Preceding gene: 91213043
Following gene: 91213046
Centisome position: 78.27
GC content: 51.96
Gene sequence:
>1680_bases ATGACTCAATTTACGCAAAATACCGCCATGCCTTCTTCCCTCTGGCAATACTGGCGCGGCCTTTCCGGCTGGAACTTCTA TTTTCTGGTTAAGTTCGGCCTGTTGTGGGCGGGATATCTTAACTTCCATCCGCTCCTCAATCTGGTGTTTGCCGCGTTTC TGCTGATGCCCATTCCGCGCTACAGCCTGCATCGCTTGCGCCACTGGATTGCCCTGCCGATCGGCTTTGCTTTGTTCTGG CATGACACCTGGTTGCCTGGCCCGGAAAGCATAATGAGCCAGGGTTCGCAGGTGGCGGGGTTCAGTACCGATTATTTAAT CGATCTTGTCACACGCTTTATTAACTGGCAGATGATTGGGGCCATTTTTGTTTTATTCGTGGCCTGGTTATTCCTGTCAC AATGGATTCGCATTACCGTTTTTGTGGTTGCCATTCTGCTATGGCTGAACGTACTTACCCTGGCGGGACCAAGTTTCTCC TTGTGGCCAGCCGGTCAACCGACGACCACTGTAACAACGACGGGTGGTAACGCAGCGGCAACCGTTGCGGCGACGGGTGG CGCACCGGTAGTGGGTGATATACCCGCACAAACTGCACCGCCAACAACAGCAAACCTTAACGCCTGGCTGAATAATTTCT ATAACGCGGAGGCGAAACGTAAATCGATCTTCCCGTCTTCGCTGCCCGCTGATGCTCAGCCATTTGAACTACTGGTGATT AATATCTGTTCGCTTTCCTGGTCGGATATTGAAGCCGCCGGATTGATGTCGCATCCACTGTGGTCGCATTTCGATATTGA GTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTT CGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTGTCGAAACTGGGCTTTACCCAGCAC CTGATGATGGGACATAACGGCCAGTTCGGTGGTTTTTTGAAGGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGAT GGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCCGTGCTTAACCGTT GGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCAT TATCCGGGCGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAAAAATTCTTTGATGAACTGGACGCCTTCTTTACTGA ACTGGAGAAATCGGGTCGTAAAGTGATGGTGGTAGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGG TATCTGGTCTACGTGATATCCCTAGCCCGTCTATCACAGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCA CATCAGGGGGCTCCGATTGTCATCGACCAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTAGTTCGCGTTCTTGATGG CAAGATTTTCTCCGAAGACAATGTTGACTGGAAAAAACTCACCAGTGGGTTACCACAAACAGCACCGGTCTCTGAGAACT CAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAA
Upstream 100 bases:
>100_bases GACGCATTCGCGACACCTTACGTTTGTTCTTTGCTAAACCTCGTTATGTTAAACCGGCCGGGACGTTACGCCGCACGGAA AAAGCCAGGGCAACCAAAAA
Downstream 100 bases:
>100_bases GAACGAAAAAGGCCGCAGAGTTTCCCCCTGCGGCCTGATCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATG ACACGTTACTTCCGCTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPIPRYSLHRLRHWIALPIGFALFW HDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLFVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFS LWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDIPAQTAPPTTANLNAWLNNFYNAEAKRKSIFPSSLPADAQPFELLVI NICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQH LMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNH YPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAP HQGAPIVIDQPSSFLAISDLVVRVLDGKIFSEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ
Sequences:
>Translated_559_residues MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPIPRYSLHRLRHWIALPIGFALFW HDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLFVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFS LWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDIPAQTAPPTTANLNAWLNNFYNAEAKRKSIFPSSLPADAQPFELLVI NICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQH LMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNH YPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAP HQGAPIVIDQPSSFLAISDLVVRVLDGKIFSEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ >Mature_558_residues TQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPIPRYSLHRLRHWIALPIGFALFWH DTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLFVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSL WPAGQPTTTVTTTGGNAAATVAATGGAPVVGDIPAQTAPPTTANLNAWLNNFYNAEAKRKSIFPSSLPADAQPFELLVIN ICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHL MMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHY PGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPH QGAPIVIDQPSSFLAISDLVVRVLDGKIFSEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789960, Length=559, Percent_Identity=98.9266547406082, Blast_Score=1140, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017744 [H]
Pfam domain/function: PF11658 DUF3260 [H]
EC number: NA
Molecular weight: Translated: 62032; Mature: 61901
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPIPR CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH YSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIG HHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AIFVLFVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCEEE TVAATGGAPVVGDIPAQTAPPTTANLNAWLNNFYNAEAKRKSIFPSSLPADAQPFELLVI EEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEE NICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQ EECCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC PANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFD CCCCCEEEEECHHHHCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECC GSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDE CCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH LDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAP HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCC HQGAPIVIDQPSSFLAISDLVVRVLDGKIFSEDNVDWKKLTSGLPQTAPVSENSNAVVIQ CCCCCEEEECCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEE YQDKPYVRLNGGDWVPYPQ ECCCCEEEECCCCCCCCCC >Mature Secondary Structure TQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPIPR CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH YSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIG HHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AIFVLFVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCEEE TVAATGGAPVVGDIPAQTAPPTTANLNAWLNNFYNAEAKRKSIFPSSLPADAQPFELLVI EEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEE NICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQ EECCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC PANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFD CCCCCEEEEECHHHHCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECC GSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDE CCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH LDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAP HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCC HQGAPIVIDQPSSFLAISDLVVRVLDGKIFSEDNVDWKKLTSGLPQTAPVSENSNAVVIQ CCCCCEEEECCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEE YQDKPYVRLNGGDWVPYPQ ECCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]