| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
Click here to switch to the map view.
The map label for this gene is gatY [H]
Identifier: 91212979
GI number: 91212979
Start: 3890426
End: 3891277
Strand: Direct
Name: gatY [H]
Synonym: UTI89_C4005
Alternate gene names: 91212979
Gene position: 3890426-3891277 (Clockwise)
Preceding gene: 91212978
Following gene: 91212984
Centisome position: 76.8
GC content: 49.88
Gene sequence:
>852_bases ATGCCATTAGTTAATGGACGGATACTGCTCGACCGCATTCAGGAAAAACGGGTATTAGCGGGCGCATTTAATACCACCAA TCTGGAGACAACGATTTCAATTTTAAACGCCATTGAGCGTTCAGGATTACCCAACTTCATTCAGATTGCGCCCACCAATG CACAACTGTCGGGATACGATTACATTTATGAAATCGTGAAACGTCACGCTGATAAAATGGATGTTCCGGTCAGTCTTCAT CTTGATCACGGGAAAACTCAGGAGGATGTTAAACAGGCGGTGCGCGCGGGCTTTACCTCGGTCATGATTGACGGTGCCGC ATTCTCTTTTGAAGAGAATATCGCTTTCACCCAGGAAGCTGTCGATTTCTGTAAATCCTATGGCGTACCGGTTGAAGCGG AGCTGGGGGCGATTCTCGGCAAAGAAGACGATCACGTCAGCGAAGCCGATTGCAAAACGGAACCGGAAAAGGTGAAGACC TTTGTCGAACGCACCGGTTGCGACATGCTGGCAGTTTCTATTGGTAACGTTCATGGCCTGGACGATATACCGCGGATCGA TATCCCCCTGCTGAAGCGCATTGCCGAAGTCAGCCCGGTGCCGCTGGTTATTCACGGCGGCTCCGGTATCGCCCCGGAGA TATTACGCAGTTTCGTTAATTATCGCGTCGCTAAAGTGAATATCGCCAGCGATCTGCGCAAAGCGTTTATCACCGCAGTC GGCAAAGCGTATGTGAATAATCACAACGAGGCGAATCTGGCACGGGTGATGGCATCAGCAAAAAACGCCGTCGAGGAAGA TGTGTATAGCAAAATCCTGATGATGAATGAGGGGCATCGGTTGGGTAAGTAA
Upstream 100 bases:
>100_bases GATGATGAAAACGAGGCAATACAAACTCTCACTACCTTATTTCGCGACCGCTTCGGTGAAGCTGAATAATTAACTGATAT TAAAAGATGAGGTTTTCAAT
Downstream 100 bases:
>100_bases ATCTTCGCCGGATGCGGCGTGACGCCTTATCCGGCCTACAAAACCACTAAAATTCAATAAATTGCACCAATGCGTAGACC CTATAAGCTTACGCATCGGG
Product: putative fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase [H]
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MPLVNGRILLDRIQEKRVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYDYIYEIVKRHADKMDVPVSLH LDHGKTQEDVKQAVRAGFTSVMIDGAAFSFEENIAFTQEAVDFCKSYGVPVEAELGAILGKEDDHVSEADCKTEPEKVKT FVERTGCDMLAVSIGNVHGLDDIPRIDIPLLKRIAEVSPVPLVIHGGSGIAPEILRSFVNYRVAKVNIASDLRKAFITAV GKAYVNNHNEANLARVMASAKNAVEEDVYSKILMMNEGHRLGK
Sequences:
>Translated_283_residues MPLVNGRILLDRIQEKRVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYDYIYEIVKRHADKMDVPVSLH LDHGKTQEDVKQAVRAGFTSVMIDGAAFSFEENIAFTQEAVDFCKSYGVPVEAELGAILGKEDDHVSEADCKTEPEKVKT FVERTGCDMLAVSIGNVHGLDDIPRIDIPLLKRIAEVSPVPLVIHGGSGIAPEILRSFVNYRVAKVNIASDLRKAFITAV GKAYVNNHNEANLARVMASAKNAVEEDVYSKILMMNEGHRLGK >Mature_282_residues PLVNGRILLDRIQEKRVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYDYIYEIVKRHADKMDVPVSLHL DHGKTQEDVKQAVRAGFTSVMIDGAAFSFEENIAFTQEAVDFCKSYGVPVEAELGAILGKEDDHVSEADCKTEPEKVKTF VERTGCDMLAVSIGNVHGLDDIPRIDIPLLKRIAEVSPVPLVIHGGSGIAPEILRSFVNYRVAKVNIASDLRKAFITAVG KAYVNNHNEANLARVMASAKNAVEEDVYSKILMMNEGHRLGK
Specific function: Catalytic subunit of the tagatose-1,6-bisphosphate aldolase KbaYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6- bisphosphate (T
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family. TagBP aldolase KbaY subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=284, Percent_Identity=35.9154929577465, Blast_Score=171, Evalue=4e-44, Organism=Escherichia coli, GI87082041, Length=277, Percent_Identity=36.4620938628159, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1788072, Length=221, Percent_Identity=38.0090497737557, Blast_Score=151, Evalue=5e-38, Organism=Escherichia coli, GI1789293, Length=234, Percent_Identity=28.6324786324786, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000771 - InterPro: IPR011288 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.40 [H]
Molecular weight: Translated: 31016; Mature: 30885
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00602 ALDOLASE_CLASS_II_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVNGRILLDRIQEKRVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYD CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH YIYEIVKRHADKMDVPVSLHLDHGKTQEDVKQAVRAGFTSVMIDGAAFSFEENIAFTQEA HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEECCCCCCHHCCHHHHHHH VDFCKSYGVPVEAELGAILGKEDDHVSEADCKTEPEKVKTFVERTGCDMLAVSIGNVHGL HHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC DDIPRIDIPLLKRIAEVSPVPLVIHGGSGIAPEILRSFVNYRVAKVNIASDLRKAFITAV CCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHEEEEEEHHHHHHHHHHHHH GKAYVNNHNEANLARVMASAKNAVEEDVYSKILMMNEGHRLGK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PLVNGRILLDRIQEKRVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYD CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH YIYEIVKRHADKMDVPVSLHLDHGKTQEDVKQAVRAGFTSVMIDGAAFSFEENIAFTQEA HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEECCCCCCHHCCHHHHHHH VDFCKSYGVPVEAELGAILGKEDDHVSEADCKTEPEKVKTFVERTGCDMLAVSIGNVHGL HHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC DDIPRIDIPLLKRIAEVSPVPLVIHGGSGIAPEILRSFVNYRVAKVNIASDLRKAFITAV CCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHEEEEEEHHHHHHHHHHHHH GKAYVNNHNEANLARVMASAKNAVEEDVYSKILMMNEGHRLGK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA