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The map label for this gene is ygfM [H]

Identifier: 91212258

GI number: 91212258

Start: 3199207

End: 3199986

Strand: Direct

Name: ygfM [H]

Synonym: UTI89_C3265

Alternate gene names: 91212258

Gene position: 3199207-3199986 (Clockwise)

Preceding gene: 91212257

Following gene: 91212259

Centisome position: 63.15

GC content: 53.72

Gene sequence:

>780_bases
ATGATTGAACAATTTTTCAGACCCGACTCAGTCGAACAGGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTG
GTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGGAGC
TGGACTGGATTGACTGGGATAACGGTGCACTACGAATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTT
ATTCCTGCAGCACTGTGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAAT
CGCCGCCCGGCAGGAAGAGTCGGTGCTGCTTCCCGTCCTGCTGGCACTGGATGCTGAACTGGTTTTTGGCAACGGCGAAA
CGCTGTCAATCGAGGACTACCTGGCCTGCCCATGCGATCGCCTGTTAACCGAAATTATCATTAAAGATCCGTATCGCACC
TGTGCGACTCGCAAAATTAGCCGTTCTCAGGCAGGTTTAACCGTCGTGACGGCAGCCGTTGCAATAACAGACCACGACGG
TATGCGAATTGCGCTGGATGGCGTAGCCAGTAAAGCACTGCGTCTGCATGATGTTGAAACTCAAAATCTGGAAGGCAATG
CACTTGAACAGGCTGTCGCCAACGCCATTTTCCCGCAGGAAGATTTGCGGGGCAGCGTGGCCTATAAACGCTATATCACG
GGAGTTCTGGTAGCCGACCTGTATGCCGACTGCCAACAGGCTGGGGAGGAAGCCGTATGA

Upstream 100 bases:

>100_bases
CCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACAGCTCCCCTCTTCTTTCAGAGAAGA
GGGGAAATTAAGGAAAGACG

Downstream 100 bases:

>100_bases
TCATCCACTTTACTTTAAATGGCGCGCCTCAGGAGCTAACCGTTAATCCAGGCGAAAACGTGCAAAAGCTGTTGTTTAAC
ATGGGAATGCACTCTGTACG

Product: putative selenate reductase subunit YgfM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWDNGALRIGAMSRLQPLRDARF
IPAALCEALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRT
CATRKISRSQAGLTVVTAAVAITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
GVLVADLYADCQQAGEEAV

Sequences:

>Translated_259_residues
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWDNGALRIGAMSRLQPLRDARF
IPAALCEALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRT
CATRKISRSQAGLTVVTAAVAITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
GVLVADLYADCQQAGEEAV
>Mature_259_residues
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWDNGALRIGAMSRLQPLRDARF
IPAALCEALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRT
CATRKISRSQAGLTVVTAAVAITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
GVLVADLYADCQQAGEEAV

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789245, Length=259, Percent_Identity=98.4555984555985, Blast_Score=521, Evalue=1e-149,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346
- InterPro:   IPR017698 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: NA

Molecular weight: Translated: 28566; Mature: 28566

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWD
CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECC
NGALRIGAMSRLQPLRDARFIPAALCEALGFVYSRHVRNQSTIGGEIAARQEESVLLPVL
CCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHH
LALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAV
HHCCCEEEECCCCEEEEHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE
AITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
EEECCCCCEEEEEHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHH
GVLVADLYADCQQAGEEAV
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWD
CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECC
NGALRIGAMSRLQPLRDARFIPAALCEALGFVYSRHVRNQSTIGGEIAARQEESVLLPVL
CCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHH
LALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAV
HHCCCEEEECCCCEEEEHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE
AITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT
EEECCCCCEEEEEHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHH
GVLVADLYADCQQAGEEAV
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]