| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is ssnA [H]
Identifier: 91212257
GI number: 91212257
Start: 3197828
End: 3199156
Strand: Direct
Name: ssnA [H]
Synonym: UTI89_C3264
Alternate gene names: 91212257
Gene position: 3197828-3199156 (Clockwise)
Preceding gene: 91212256
Following gene: 91212258
Centisome position: 63.13
GC content: 52.6
Gene sequence:
>1329_bases ATGTTGATTCTGAAGAATGTCACCGCAGTGCAGTTACACCCGGCGAAAGTGCAGGAAGGCGTTGATATCGCCATCGAAAA TGATGTGATTGTCGCTATCGACGATGCCCTGACGCAACGCTATCCCGATGCCAGCTACAAAGAGATGCATGGTCGGATTG TGATGCCGGGAATTGTCTGCTCGCACAACCATTTTTACTCGGGGCTGTCCCGCGGAATTATGGCAAACATCGCCCCCTGC CCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGACTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGG ACTGATTTGTTCCCTGGAAGCGATTAAGAGTGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGACG GGTCGCTCTCCACATTGCGCAACGCATTTTTAAAAGTTGGCCTGCGCGCGATGACCTGTTTTGAAACTACTGACCGTAAC AACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGCTTCGCCCGTCAGATTGATGAGGCGAAGAAAGCAGC AACCGAGCCGTATCTGGTGGAAGCTCATATCGGCGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGC GTGAAGCCGTGAAAAGCACAGGTCGTGGTTTGCATATTCACGCTGCGGAAGACCTTTACGACGTTTCCTACAGTCACCAT TGGTACGGCAAAGACCTGCTGGCACGACTGGCGCAATTCGATCTCATCGACAGCAAAACGCTGGTCGCTCATGGGCTGTA CTTGTCGAAAGATGACATCGCCCTACTCAATCAGCGCGATGCGTTCCTGGTGCATAACGCCCGTTCAAACATGAACAACC ATGTCGGCTACAACCATCACCTTAGCGACATCCGCAATCTGGCGTTGGGAACGGACGGCATTGGTTCGGACATGTTTGAA GAGATGAAATTTGCCTTCTTTAAACATCGCGATGCGGGTGGCCCGCTGTGGCCTGACAGTTTTGCCAAAGCACTGGCTAA CGGCAACGAACTGATGAGCCGCAACTTTGGCGCGAAATTTGGGCTTCTGGAAGCCGGTTACAAAGCCGATTTAACCATTT GCGATTACAACTCGCCGACGCCGCTGCTGGCAGACAATATCGCCGGGCATATCGCTTTCGGTATGGGCTCAGGCAGCGTT CACAGCGTGATGGTCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCGCAAGC CAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAA
Upstream 100 bases:
>100_bases AGTTCAACAACGTACCACCGGAGCTGAACGATATGTGCCGCATCATTAGCCATGTCCACCAGCATCATCATTATCTGCTG GGCCGCGTGGAGGTGTAATC
Downstream 100 bases:
>100_bases ATAACAGCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCA GTCGAACAGGCGCTGGAACT
Product: putative chlorohydrolase/aminohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIDDALTQRYPDASYKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPC PDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIDGSLSTLRNAFLKVGLRAMTCFETTDRN NGIKELQEGVEENIRFARQIDEAKKAATEPYLVEAHIGAHAPFTVPDAGLEMLREAVKSTGRGLHIHAAEDLYDVSYSHH WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDIALLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFE EMKFAFFKHRDAGGPLWPDSFAKALANGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSV HSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA
Sequences:
>Translated_442_residues MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIDDALTQRYPDASYKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPC PDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIDGSLSTLRNAFLKVGLRAMTCFETTDRN NGIKELQEGVEENIRFARQIDEAKKAATEPYLVEAHIGAHAPFTVPDAGLEMLREAVKSTGRGLHIHAAEDLYDVSYSHH WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDIALLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFE EMKFAFFKHRDAGGPLWPDSFAKALANGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSV HSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA >Mature_442_residues MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIDDALTQRYPDASYKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPC PDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIDGSLSTLRNAFLKVGLRAMTCFETTDRN NGIKELQEGVEENIRFARQIDEAKKAATEPYLVEAHIGAHAPFTVPDAGLEMLREAVKSTGRGLHIHAAEDLYDVSYSHH WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDIALLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFE EMKFAFFKHRDAGGPLWPDSFAKALANGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSV HSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA
Specific function: Unknown
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Escherichia coli, GI87082177, Length=442, Percent_Identity=97.737556561086, Blast_Score=900, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 - InterPro: IPR017700 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 48928; Mature: 48928
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIDDALTQRYPDASYKEMHGRIVMPGIVC CEEECCCCEEEEEHHHHHCCCEEEEECCEEEEECHHHHHCCCCCCHHHHCCEEEECCEEE SHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCT CCCHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SVIDHHASPAYIDGSLSTLRNAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARQI HHHHCCCCCCEECCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHH DEAKKAATEPYLVEAHIGAHAPFTVPDAGLEMLREAVKSTGRGLHIHAAEDLYDVSYSHH HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCC WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDIALLNQRDAFLVHNARSNMNNHVGYNHH CCCHHHHHHHHHHHCCCCCHHHHHCEEECCCCEEEECCCCEEEEECCHHCCCCCCCCCCH LSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALANGNELMSRNFGAKF HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCC GLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDC CHHCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCEEEECCEEEEECCCCCCCH DSIYAQARKAAASMWRRMDALA HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIDDALTQRYPDASYKEMHGRIVMPGIVC CEEECCCCEEEEEHHHHHCCCEEEEECCEEEEECHHHHHCCCCCCHHHHCCEEEECCEEE SHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCT CCCHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SVIDHHASPAYIDGSLSTLRNAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARQI HHHHCCCCCCEECCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHH DEAKKAATEPYLVEAHIGAHAPFTVPDAGLEMLREAVKSTGRGLHIHAAEDLYDVSYSHH HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCC WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDIALLNQRDAFLVHNARSNMNNHVGYNHH CCCHHHHHHHHHHHCCCCCHHHHHCEEECCCCEEEECCCCEEEEECCHHCCCCCCCCCCH LSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALANGNELMSRNFGAKF HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCC GLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDC CHHCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCEEEECCEEEEECCCCCCCH DSIYAQARKAAASMWRRMDALA HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7764507; 9278503; 10074077 [H]