| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yfaD [H]
Identifier: 91211538
GI number: 91211538
Start: 2493836
End: 2494021
Strand: Direct
Name: yfaD [H]
Synonym: UTI89_C2526
Alternate gene names: 91211538
Gene position: 2493836-2494021 (Clockwise)
Preceding gene: 91211537
Following gene: 91211545
Centisome position: 49.23
GC content: 50.54
Gene sequence:
>186_bases ATGACTATTGCTGAACGGTTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAGGGTAAATTAGAAGGCATGCATGAACA AGCCATTAAAATTGCCTTGCGCATGCTGGAACAGGGCATTGATCGTGACCAGGTGCTCGCGGCCACTCAGCTAAGCGAAG CCGATCTGGCAGCGAATAACCACTAA
Upstream 100 bases:
>100_bases CTTGCGCATGCTGGAACAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCTCTGATGCTGATATTCCGAACT GTTATTAAAAGGAGAGATTA
Downstream 100 bases:
>100_bases TTAACACAGGCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTACGCGTGGCCCATTTTTGCCTGAT TTAAACATCGCCAGTCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MTIAERLRQEGHQIGWQEGKLEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH
Sequences:
>Translated_61_residues MTIAERLRQEGHQIGWQEGKLEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH >Mature_60_residues TIAERLRQEGHQIGWQEGKLEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]
Homologues:
Organism=Escherichia coli, GI87082070, Length=61, Percent_Identity=96.7213114754098, Blast_Score=119, Evalue=4e-29, Organism=Escherichia coli, GI1788577, Length=61, Percent_Identity=75.4098360655738, Blast_Score=89, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010106 - InterPro: IPR006842 [H]
Pfam domain/function: PF04754 Transposase_31 [H]
EC number: NA
Molecular weight: Translated: 6865; Mature: 6734
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAERLRQEGHQIGWQEGKLEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANN CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC H C >Mature Secondary Structure TIAERLRQEGHQIGWQEGKLEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANN CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 3286606; 7984428 [H]