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The map label for this gene is yohD [H]

Identifier: 91211423

GI number: 91211423

Start: 2366966

End: 2367580

Strand: Direct

Name: yohD [H]

Synonym: UTI89_C2410

Alternate gene names: 91211423

Gene position: 2366966-2367580 (Clockwise)

Preceding gene: 162138409

Following gene: 91211427

Centisome position: 46.72

GC content: 54.15

Gene sequence:

>615_bases
ATGCTTACAGGCAAGCAAAGGGAGACAGACTGTCCTATGGATCTCAATACACTCATCTCACAATATGGTTATGCCGCGCT
GGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGTTGCGGCACATCAGGGGCTATTAAAGTTCC
CGCTGGTGGTACTTTCTGTGGCGCTTGGCGGCATGATTGGCGACCAGGTGCTTTATCTGTGCGGGCGGCGGTTTGGCGGC
AAGCTGTTACGCCGTTTCTCGAAACATCAGGATAAAATTGAGCGGGCGCAGAAACTTATCCAACGCCATCCGTATCTGTT
TGTCATTGGTACGCGTTTTATGTATGGCTTTCGGGTCATTGGCCCGACGCTGATTGGTGCCAGCCAGCTGCCGCCGAAAA
TCTTTCTGCCGCTGAATATTCTCGGCGCATTTGCCTGGTCGCTGATTTTTACCACTATCGGTTACGCTGGTGGGCAGGTG
ATTGCGCCGTGGTTGCACAATCTCGACCAGCATTTGAAGCACTGGGTCTGGTTGATTCTGGTCGTGGTTCTGGTGGTAGG
CGTGCGCTGGTGGCTGAAACGGCGCGGGAAGAAAAAGCCGGATCATCAGGCGTAA

Upstream 100 bases:

>100_bases
AGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCTCATGTAATTTGCACCGTCTGATGTACGTCCTTTTTCAGC
GTGAATGATTCACAGGGTGT

Downstream 100 bases:

>100_bases
AACTATTGCCCTGGATAAGGTGTTCGCGCCGCATCCGACATCCGGTGCACCATGCCTGATGCGACGCTGGCGTGTCTTAT
CTGGCCTAACCCAATGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLTGKQRETDCPMDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGG
KLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWSLIFTTIGYAGGQV
IAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA

Sequences:

>Translated_204_residues
MLTGKQRETDCPMDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGG
KLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWSLIFTTIGYAGGQV
IAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA
>Mature_204_residues
MLTGKQRETDCPMDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGG
KLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWSLIFTTIGYAGGQV
IAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI87082056, Length=192, Percent_Identity=99.4791666666667, Blast_Score=383, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22822; Mature: 22822

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGKQRETDCPMDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSV
CCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
ALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHH
GPTLIGASQLPPKIFLPLNILGAFAWSLIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLIL
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VVVLVVGVRWWLKRRGKKKPDHQA
HHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLTGKQRETDCPMDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSV
CCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
ALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHH
GPTLIGASQLPPKIFLPLNILGAFAWSLIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLIL
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VVVLVVGVRWWLKRRGKKKPDHQA
HHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]