| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yafX2 [H]
Identifier: 91211288
GI number: 91211288
Start: 2215567
End: 2216112
Strand: Direct
Name: yafX2 [H]
Synonym: UTI89_C2275
Alternate gene names: 91211288
Gene position: 2215567-2216112 (Clockwise)
Preceding gene: 91211286
Following gene: 91211289
Centisome position: 43.74
GC content: 53.3
Gene sequence:
>546_bases GTGATGAACGTGATGTTGTCAGCCCCCGGCCTTTACTCCCTCTCATTTATTCACATTACAAGGATTTCATACATGAAAAC ATTGTCTCAGAACACCACCTCTTCGGCCTGTGCACCGGAGACTGGCCTGCAACAACTGGTTGCCACCATAGTCCCTGATG AACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGGAGCCCCGGGTCTTCGGCTGG ATGGACCGTCTGTGCGAAAACTACTGCGGGGGTATCTGGAATCTGTACACCCTGAACAACGGTGGCGCATTTATAGCACC TGAACCGGATGAAGATGATGGAGAAACCTGGATACTGTTCAATGCCATGAACGGTAACCGCGCTGAAATGAGCCCGGAAG CTGCCGGCATTGCCGCCTGTCTGATGACGTACAGCCATCATGCCTGTCGTACGGAGAATTATGCCATGACGGTCCATTAT TACCGGTTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATTGACTGA
Upstream 100 bases:
>100_bases CATCTGGCCATCCGTCTGTGACCGGAACGGTTACGCGTACGGCTGTCCGGAATTTCAGCCGAATATCATTCATCCCTGAC ATTACCGGGTCTCACGGTCA
Downstream 100 bases:
>100_bases AAGGGGCCGGAATAATGCAACAGATTTCCTTTCTGCCCGGAGAAATGACGCCCGGCGAGCGCAGTCACATTCTGCGGGCC CTGAAAACCCTGGACCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MMNVMLSAPGLYSLSFIHITRISYMKTLSQNTTSSACAPETGLQQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGW MDRLCENYCGGIWNLYTLNNGGAFIAPEPDEDDGETWILFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHY YRLRDYALQHPECSAIMRIID
Sequences:
>Translated_181_residues MMNVMLSAPGLYSLSFIHITRISYMKTLSQNTTSSACAPETGLQQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGW MDRLCENYCGGIWNLYTLNNGGAFIAPEPDEDDGETWILFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHY YRLRDYALQHPECSAIMRIID >Mature_181_residues MMNVMLSAPGLYSLSFIHITRISYMKTLSQNTTSSACAPETGLQQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGW MDRLCENYCGGIWNLYTLNNGGAFIAPEPDEDDGETWILFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHY YRLRDYALQHPECSAIMRIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antirestriction protein family [H]
Homologues:
Organism=Escherichia coli, GI1788996, Length=137, Percent_Identity=73.7226277372263, Blast_Score=218, Evalue=2e-58, Organism=Escherichia coli, GI1786442, Length=157, Percent_Identity=65.6050955414013, Blast_Score=218, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004914 - ProDom: PD012854 [H]
Pfam domain/function: PF03230 Antirestrict [H]
EC number: NA
Molecular weight: Translated: 20523; Mature: 20523
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNVMLSAPGLYSLSFIHITRISYMKTLSQNTTSSACAPETGLQQLVATIVPDEQRISFW CCEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEC PQHFGLIPQWVTLEPRVFGWMDRLCENYCGGIWNLYTLNNGGAFIAPEPDEDDGETWILF HHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEE NAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRII ECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEHHHHCCCCCHHHHHHHC D C >Mature Secondary Structure MMNVMLSAPGLYSLSFIHITRISYMKTLSQNTTSSACAPETGLQQLVATIVPDEQRISFW CCEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEC PQHFGLIPQWVTLEPRVFGWMDRLCENYCGGIWNLYTLNNGGAFIAPEPDEDDGETWILF HHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEE NAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRII ECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEHHHHCCCCCHHHHHHHC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]