| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is istA [H]
Identifier: 91211272
GI number: 91211272
Start: 2199197
End: 2199469
Strand: Direct
Name: istA [H]
Synonym: UTI89_C2259
Alternate gene names: 91211272
Gene position: 2199197-2199469 (Clockwise)
Preceding gene: 91211269
Following gene: 91211274
Centisome position: 43.41
GC content: 52.38
Gene sequence:
>273_bases TTGGGTGTGGATCACTATTGCACCGTTCGTGACACAATGGGCCATACGGGCCGACGTTCCATGCCGCGTTACTACATTCA GCCCGGACGTAAAATGCGCCCGTCAAAAAGAACGGTTCGCTTCGAAACTCAGCCAGGATACCACCTCTCCGCCACACCCG GGAAGAAGTTGATATGGTGGTTGCCGGACAACAGAGCTCCTGGATTGACTGCTGCATCACTCAACCACGCTGAATATCAA AGGAGAGCGTTACCGGTTAAAAGAGAAACGTAA
Upstream 100 bases:
>100_bases CTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCC CCTGGATCTGATTTCAGGCG
Downstream 100 bases:
>100_bases AGCTGTGGTGATGACCCAAAACGCAACGCCTGTCAGTGAGGATGAAATGGTGAAAAGCGGACAGCACCAGTAACGGAAGT ATCTTAGCGGGTACGAAAAT
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MGVDHYCTVRDTMGHTGRRSMPRYYIQPGRKMRPSKRTVRFETQPGYHLSATPGKKLIWWLPDNRAPGLTAASLNHAEYQ RRALPVKRET
Sequences:
>Translated_90_residues MGVDHYCTVRDTMGHTGRRSMPRYYIQPGRKMRPSKRTVRFETQPGYHLSATPGKKLIWWLPDNRAPGLTAASLNHAEYQ RRALPVKRET >Mature_89_residues GVDHYCTVRDTMGHTGRRSMPRYYIQPGRKMRPSKRTVRFETQPGYHLSATPGKKLIWWLPDNRAPGLTAASLNHAEYQR RALPVKRET
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG4584
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017894 - InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 10452; Mature: 10321
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVDHYCTVRDTMGHTGRRSMPRYYIQPGRKMRPSKRTVRFETQPGYHLSATPGKKLIWW CCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCEEEEE LPDNRAPGLTAASLNHAEYQRRALPVKRET CCCCCCCCCEEECCCCHHHHHHCCCCCCCC >Mature Secondary Structure GVDHYCTVRDTMGHTGRRSMPRYYIQPGRKMRPSKRTVRFETQPGYHLSATPGKKLIWW CCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCEEEEE LPDNRAPGLTAASLNHAEYQRRALPVKRET CCCCCCCCCEEECCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2824781 [H]