| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is adrB [H]
Identifier: 91211032
GI number: 91211032
Start: 1925086
End: 1926714
Strand: Direct
Name: adrB [H]
Synonym: UTI89_C2011
Alternate gene names: 91211032
Gene position: 1925086-1926714 (Clockwise)
Preceding gene: 91211031
Following gene: 91211035
Centisome position: 38.0
GC content: 50.21
Gene sequence:
>1629_bases TTGTCGCCATACGCTTACAGGGTGGCCCGCATGCAAAAAGCACAACGGATCATTAAAACCTATCGCCGTAATCGAATGAT TGTTTGTACGATTTGCGCACTCGTTACGCTCGCTTCGACCCTGAGCGTGCGATTTATTTCACAGCGTAACTTAAATCAAC AACGGGTAGTACAATTCGCCAATCACGCTGTAGAGGAATTAGATAAAGTACTGCTTCCCCTACAGGCAGGTAGCGAAGTC TTGCTTCCGCTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCGGCAAAACTCCAAACTGTGCG ATCCATTGGCCTGGTGCAAGACGGCACACTTTATTGCTCCAGCATTTTTGGTTATCGCAATGTGCCCGTCGTGGACATTC TGGCTGAACTTCCTGCACCGCAACCACTTTTACGACTGACGACCGACCGTGCCCTGATAAAAGGCAGTCCGGTTTTGATT CAATGGACGCCTGCAGCGGGCAGTAGCAATGCTGGGGTCATGGAGATGATTAACATCGACTTACTGACGGCAATGCTCCT TGAACCACAACTGCCGCAAATCAGTAGCGCCAGCCTGACGGTGGACAGTCGGCATTTGCTCTATGGTAATGGGCTGGTAG ATTCCCTTCCGCAACCTGAAAACAATGAAAACTATCAGGTTTCTTCGCAACGCTTTCCTTTTACCATTAACGTTAATGGT CCGGGGGCTACGGCGCTGGCATGGCACTATCTTCCAACACAATTACCGCTGGCGGTGCTGCTAAGTTTACTTGTGGGCTA TATCGCCTGGCTGGCGACCGCTTACCGAATGAGTTTTTCCCGCGAAATCAATCTGGGCCTGGCGCAACATGAGTTCGAAT TGTTCTGCCAGCCTTTGCTTAATGCGCGCAGCCAGCAATGTATTGGCGTAGAGATTTTGCTGCGCTGGAACAATCCGCGT CAGGGCTGGATTTCGCCGGATGTGTTTATTCCTATCGCGGAAGAACATCATTTAATTGTGCCACTGACCCGCTATGTGAT GGCAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATT TTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATC ACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTACATCGTAAAAACGTCAAACTGGCGATTGA TGACTTCGGCACCGGCAATAGTTCATTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTA CCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCACTGGGGCAAAGACTGAATATTGAA CTGGTGGCGGAGGGTGTGGAAACGCAAGAACAGGCGAAATATTTGCGCCGTCATGGCGTCCATATTTTGCAAGGGTATTT GTACGCACAGCCGATGCCACTATGTGATTTTCCCAAATGGCTGGCGGGCAGCCAACCGCCGCCCGCCCGGCATAATGGAC ATATCACCCCCATTATGCCGTTACGTTAA
Upstream 100 bases:
>100_bases TACTTCTTATTCGCCCATCTGCAACGGATGGGCGAATTTATTCCCGCTTTCTCGTCTGCTGTAATTTTCCCCACTACACT TCCACTGTTGCGTCAGGCGT
Downstream 100 bases:
>100_bases CGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAACACGATAATCATTGGCTTCAATGA TGGTGATATGCAGTGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MSPYAYRVARMQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTTDRALIKGSPVLI QWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDSRHLLYGNGLVDSLPQPENNENYQVSSQRFPFTINVNG PGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPR QGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEI TERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIE LVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLCDFPKWLAGSQPPPARHNGHITPIMPLR
Sequences:
>Translated_542_residues MSPYAYRVARMQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTTDRALIKGSPVLI QWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDSRHLLYGNGLVDSLPQPENNENYQVSSQRFPFTINVNG PGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPR QGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEI TERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIE LVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLCDFPKWLAGSQPPPARHNGHITPIMPLR >Mature_541_residues SPYAYRVARMQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVL LPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTTDRALIKGSPVLIQ WTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDSRHLLYGNGLVDSLPQPENNENYQVSSQRFPFTINVNGP GATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQ GWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEIT ERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIEL VAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLCDFPKWLAGSQPPPARHNGHITPIMPLR
Specific function: May serve as a negative regulator of cellulose synthesis (as has been suggested for S.typhimurium); over-expression inhibits cell aggregation in strains able to produce adhesive curli fimbriae. Cyclic-di-GMP is a second messenger which controls cell surfa
COG id: COG2200
COG function: function code T; FOG: EAL domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 EAL domain [H]
Homologues:
Organism=Escherichia coli, GI87081980, Length=532, Percent_Identity=99.2481203007519, Blast_Score=1080, Evalue=0.0, Organism=Escherichia coli, GI1788502, Length=527, Percent_Identity=29.6015180265655, Blast_Score=227, Evalue=2e-60, Organism=Escherichia coli, GI87081845, Length=528, Percent_Identity=27.8409090909091, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1786507, Length=247, Percent_Identity=39.2712550607287, Blast_Score=167, Evalue=2e-42, Organism=Escherichia coli, GI1790496, Length=259, Percent_Identity=35.1351351351351, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI87081921, Length=261, Percent_Identity=33.3333333333333, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI87081743, Length=327, Percent_Identity=31.1926605504587, Blast_Score=133, Evalue=4e-32, Organism=Escherichia coli, GI1787541, Length=259, Percent_Identity=30.5019305019305, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI226510982, Length=262, Percent_Identity=31.6793893129771, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI1788849, Length=239, Percent_Identity=31.3807531380753, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI87082096, Length=242, Percent_Identity=29.7520661157025, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1787055, Length=253, Percent_Identity=30.0395256916996, Blast_Score=102, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001633 [H]
Pfam domain/function: PF00563 EAL [H]
EC number: =3.1.4.52 [H]
Molecular weight: Translated: 60801; Mature: 60669
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS50883 EAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPYAYRVARMQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFA CCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHEEHHHCCCCHHHHHHHH NHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCS HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHH SIFGYRNVPVVDILAELPAPQPLLRLTTDRALIKGSPVLIQWTPAAGSSNAGVMEMINID HHCCCCCCCHHHHHHHCCCCCCHHHEECCCCEECCCCEEEEEECCCCCCCCCCHHHHHHH LLTAMLLEPQLPQISSASLTVDSRHLLYGNGLVDSLPQPENNENYQVSSQRFPFTINVNG HHHHHHHCCCCCCCCCCEEEECCCEEEEECCHHHCCCCCCCCCCEEEECCCCCEEEEECC PGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHH NARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS CCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCC SQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRK CCEEEEEEECHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHC NVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIE CCEEEEECCCCCCCCHHHHHHCCCHHEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCCEE LVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLCDFPKWLAGSQPPPARHNGHITPIMP EEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC LR CC >Mature Secondary Structure SPYAYRVARMQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFA CCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHEEHHHCCCCHHHHHHHH NHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCS HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHH SIFGYRNVPVVDILAELPAPQPLLRLTTDRALIKGSPVLIQWTPAAGSSNAGVMEMINID HHCCCCCCCHHHHHHHCCCCCCHHHEECCCCEECCCCEEEEEECCCCCCCCCCHHHHHHH LLTAMLLEPQLPQISSASLTVDSRHLLYGNGLVDSLPQPENNENYQVSSQRFPFTINVNG HHHHHHHCCCCCCCCCCEEEECCCEEEEECCHHHCCCCCCCCCCEEEECCCCCEEEEECC PGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHH NARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS CCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCC SQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRK CCEEEEEEECHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHC NVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIE CCEEEEECCCCCCCCHHHHHHCCCHHEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCCEE LVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLCDFPKWLAGSQPPPARHNGHITPIMP EEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC LR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]