| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is dmlA [H]
Identifier: 91211018
GI number: 91211018
Start: 1913293
End: 1913463
Strand: Direct
Name: dmlA [H]
Synonym: UTI89_C1997
Alternate gene names: 91211018
Gene position: 1913293-1913463 (Clockwise)
Preceding gene: 91211012
Following gene: 91211025
Centisome position: 37.77
GC content: 48.54
Gene sequence:
>171_bases ATGACCACTGGCGGGAAACAGCCTGGCGACATCGATTTTTACGTGGTCCGGAAAAACACCGAAGGCGAATATTCCTCGCT AGGCGGTAGAGTAAATGAAGGAACAGAGAATGAAGTCGTCATTCAGGAATCGGTATTTACTCGTCGTGGTGTCGAGCGCA TTTTGCGTTAA
Upstream 100 bases:
>100_bases ATTCTACCGTTATCCGCACTTTCGCTGACGTCGACAGCTTTGAAACATAAACGGCCCAGACATTCGCTGGCTGGTAATAT TCCGGTAGCACTTGTACTAA
Downstream 100 bases:
>100_bases GCTCAAATAAGTTCATTTGAACCGCCTGCTGTTGGATTTGTAGTTTGCCGAAGCCGGACTGAGCGCGCCCAGTCCGGCTT CGGAAGATTTTACTGTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: D-malate degradation protein A; D-malate oxidase [H]
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MTTGGKQPGDIDFYVVRKNTEGEYSSLGGRVNEGTENEVVIQESVFTRRGVERILR
Sequences:
>Translated_56_residues MTTGGKQPGDIDFYVVRKNTEGEYSSLGGRVNEGTENEVVIQESVFTRRGVERILR >Mature_55_residues TTGGKQPGDIDFYVVRKNTEGEYSSLGGRVNEGTENEVVIQESVFTRRGVERILR
Specific function: Catalyzes the NAD(+)-dependent oxidative decarboxylation of D-malate into pyruvate. Is essential for aerobic growth on D- malate as the sole carbon source. But is not required for anaerobic D-malate utilization, although DmlA is expressed and active in th
COG id: COG0473
COG function: function code CE; Isocitrate/isopropylmalate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isocitrate and isopropylmalate dehydrogenases family [H]
Homologues:
Organism=Escherichia coli, GI1788101, Length=53, Percent_Identity=92.4528301886792, Blast_Score=106, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019818 - InterPro: IPR001804 - InterPro: IPR011829 [H]
Pfam domain/function: PF00180 Iso_dh [H]
EC number: =1.1.1.83 [H]
Molecular weight: Translated: 6276; Mature: 6145
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGGKQPGDIDFYVVRKNTEGEYSSLGGRVNEGTENEVVIQESVFTRRGVERILR CCCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCC >Mature Secondary Structure TTGGKQPGDIDFYVVRKNTEGEYSSLGGRVNEGTENEVVIQESVFTRRGVERILR CCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]