| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is ynjG [H]
Identifier: 91210976
GI number: 91210976
Start: 1874951
End: 1875358
Strand: Direct
Name: ynjG [H]
Synonym: UTI89_C1955
Alternate gene names: 91210976
Gene position: 1874951-1875358 (Clockwise)
Preceding gene: 91210974
Following gene: 91210978
Centisome position: 37.01
GC content: 55.15
Gene sequence:
>408_bases ATGAAAATGATTGAAGTTGTTGCCGCCATCATCGAACGTGATGGCAAAATTTTACTCGCGCAACGCCCTGCCCAGAGCGA TCAGGCGGGATTATGGGAGTTTGCCGGTGGTAAAGTCGAGCCGGATGAAAGCCAGCGGCAGGCGCTGGTGCGTGAGTTAA ACGAAGAACTGGGCATCGAAGCAACTGTTGGTGACTATGTTGCCAGCCATCAGCGAGAAGTTTCGGGGCGGATTATCCAT CTTCATGCCTGGCACGTACCCGACTTCCACGGGACGTTACAGGCACATGAACATCAGGCGCTGGTCTGGTGCTCACCTGA AGAGGCGCTGCGATATCCGCTGGCCCCTGCTGACATTCCATTATTAGAGGCGTTTATGGCTTCACGCGCCGCCAGACCAG CGGATTAG
Upstream 100 bases:
>100_bases TGGCGGTCTAGCACAGGCACTCCTTAAATATAAAGCCTTTCTGATTGAGCAACAGTGCGGATATTATGGCATTTTTCGCT TATCTGCCCGTGTGTAATTT
Downstream 100 bases:
>100_bases TGCTTAGGGTTTTGTCATCCCGTTGGCATTGCAGCAGTATTCCTTCGGCTTTAATTACTGCCCCTTCAGAATAATTTTGA TCCTGATAAACGCAGCACTG
Product: pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase
Products: CMP; diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELNEELGIEATVGDYVASHQREVSGRIIH LHAWHVPDFHGTLQAHEHQALVWCSPEEALRYPLAPADIPLLEAFMASRAARPAD
Sequences:
>Translated_135_residues MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELNEELGIEATVGDYVASHQREVSGRIIH LHAWHVPDFHGTLQAHEHQALVWCSPEEALRYPLAPADIPLLEAFMASRAARPAD >Mature_135_residues MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELNEELGIEATVGDYVASHQREVSGRIIH LHAWHVPDFHGTLQAHEHQALVWCSPEEALRYPLAPADIPLLEAFMASRAARPAD
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=135, Percent_Identity=97.037037037037, Blast_Score=264, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 14992; Mature: 14992
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELNEELGIE CHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCC ATVGDYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALRYPLAPADIP CCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCHH LLEAFMASRAARPAD HHHHHHHHCCCCCCC >Mature Secondary Structure MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELNEELGIE CHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCC ATVGDYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALRYPLAPADIP CCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCHH LLEAFMASRAARPAD HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; H2O [C]
Specific reaction: CTP + H2O = CMP + diphosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]