| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is arpB [H]
Identifier: 91210934
GI number: 91210934
Start: 1838679
End: 1839113
Strand: Direct
Name: arpB [H]
Synonym: UTI89_C1913
Alternate gene names: 91210934
Gene position: 1838679-1839113 (Clockwise)
Preceding gene: 91210929
Following gene: 91210935
Centisome position: 36.3
GC content: 36.78
Gene sequence:
>435_bases ATGAGTAAAAACGATATCATTATCAGAACTCATTATGAGTCTCCTCTTAGAATGCACATCGATAGCGACATACTAACGCC TTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGATTTAAGTTCGATGCTGTCAT ACTGTGTTACTCAGGAATTTACCGCAAGCTGTCGAAAAATATCACACAATTGTTATACCACTGCCCTTTTTATCATTAGC TTTACCACTTCACCCATCCATGCAGAAAATACACTTATTACATTACACTATAAAAAAGAAATCATTTCCTTATTTCTGGA AACCACGCCTATTAAAGCTAACCATTTGCGAAGCATACTGGATTATATTGAACAGGAACAGTTAACTGCCGAAAAACGTA ACCATTGCATGAAACTGTCCAAAAAAAATTCATAG
Upstream 100 bases:
>100_bases GACACAATTCTTATAGCAATTTTTCGTGCGCATTTCGTTCTGGCGATAATAATCAATCATCATCCTCAAAATCTCCAGAC ATATATAAGGCGAATAGATT
Downstream 100 bases:
>100_bases AGAAAAAACCATACAGCCAACAGTAAATCTCAATGATAGTGCATTTTTTTGCAATCTCCTTCTGACACTATTTTTTGTCG CCATCTGTCATTAAAATACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSKNDIIIRTHYESPLRMHIDSDILTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTASCRKISHNCYTTALFIIS FTTSPIHAENTLITLHYKKEIISLFLETTPIKANHLRSILDYIEQEQLTAEKRNHCMKLSKKNS
Sequences:
>Translated_144_residues MSKNDIIIRTHYESPLRMHIDSDILTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTASCRKISHNCYTTALFIIS FTTSPIHAENTLITLHYKKEIISLFLETTPIKANHLRSILDYIEQEQLTAEKRNHCMKLSKKNS >Mature_143_residues SKNDIIIRTHYESPLRMHIDSDILTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTASCRKISHNCYTTALFIISF TTSPIHAENTLITLHYKKEIISLFLETTPIKANHLRSILDYIEQEQLTAEKRNHCMKLSKKNS
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 ANK repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR012927 [H]
Pfam domain/function: PF07906 Toxin_15 [H]
EC number: NA
Molecular weight: Translated: 16592; Mature: 16461
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNDIIIRTHYESPLRMHIDSDILTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEF CCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TASCRKISHNCYTTALFIISFTTSPIHAENTLITLHYKKEIISLFLETTPIKANHLRSIL HHHHHHHHCHHHHHHHHEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHH DYIEQEQLTAEKRNHCMKLSKKNS HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKNDIIIRTHYESPLRMHIDSDILTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEF CCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TASCRKISHNCYTTALFIISFTTSPIHAENTLITLHYKKEIISLFLETTPIKANHLRSIL HHHHHHHHCHHHHHHHHEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHH DYIEQEQLTAEKRNHCMKLSKKNS HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]