Click here to switch to the map view.

The map label for this gene is ydhO [H]

Identifier: 91210869

GI number: 91210869

Start: 1770209

End: 1771024

Strand: Direct

Name: ydhO [H]

Synonym: UTI89_C1846

Alternate gene names: 91210869

Gene position: 1770209-1771024 (Clockwise)

Preceding gene: 91210867

Following gene: 91210870

Centisome position: 34.94

GC content: 47.92

Gene sequence:

>816_bases
GTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGC
TTCAAAGCAAGCCAGGGAGAGTTCTGCTACTACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCA
AAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCT
TCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACACCGTCAATAAAACGGCCTCAGCCAACTTTACCGAAAA
GTGTACCAAACGTAAGGGCTATAAATCGCATTGTGTGAAAGTCAAAAATGCCGCGTCAGGAACCCTTGCCGACGCGCACA
AAGCGAAGGTGCAAAAAGCCACAAAAGTGGCAATGAATAAACTGATGCAGCAAATTGGTAAGCCATATCGTTGGGGTGGC
AGTTCACCGCGTACCGGTTTTGATTGCAGCGGTCTGGTTTATTACGCTTATAAAGATTTGGTGAAAATTCGTATTCCGCG
TACGGCGAATGAAATGTATCACCTGCGCGATGCAGCGCCAATCGAACGTAGTGAACTGAAAAACGGCGACCTGGTCTTCT
TCCGTACTCAGGGACGCGGTACAGCCGATCATGTCGGCGTGTATGTCGGCAACGGCAAATTTATTCAGTCACCGCGCACG
GGCCGGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGCCGGGTAATGACCCC
AAAAACACTTCGCTAA

Upstream 100 bases:

>100_bases
ATAAAAGCTATTAACTTTCTCTTCTTCTATGCATTAGAATCATCAAGTTTTGTAAATCAGACGCAGGCATGATAGACCTG
CCTTAACAGAGGGACGCTCA

Downstream 100 bases:

>100_bases
AACTTTACCCTGTTGTTACGGCAACAGGGTAAGTTCATCTTTTGTCTCACCTTTTAATTTGCTACCCTATCCATACGCAC
AATAAGGCTATTGTACGTAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKS
SITASKNAKTRSKHTVNKTASANFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGG
SSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRT
GREIQITSLSEDYWQRHYVGARRVMTPKTLR

Sequences:

>Translated_271_residues
MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKS
SITASKNAKTRSKHTVNKTASANFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGG
SSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRT
GREIQITSLSEDYWQRHYVGARRVMTPKTLR
>Mature_270_residues
ARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSS
ITASKNAKTRSKHTVNKTASANFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGS
SPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRTG
REIQITSLSEDYWQRHYVGARRVMTPKTLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=271, Percent_Identity=98.8929889298893, Blast_Score=551, Evalue=1e-158,
Organism=Escherichia coli, GI1786421, Length=267, Percent_Identity=35.2059925093633, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1788501, Length=122, Percent_Identity=36.0655737704918, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1788001, Length=119, Percent_Identity=36.1344537815126, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 30002; Mature: 29871

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTA
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKAASKSTTKSKTASSVKKSSITASKNAKTRSKHTVNKTASANFTEKCTKRKGYKSHCVK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCCHHHHEE
VKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGSSPRTGFDCSGLVYYAYKDL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHH
VKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRT
HEEECCCCHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCHHHEEEEECCCEEEECCCC
GREIQITSLSEDYWQRHYVGARRVMTPKTLR
CCEEEEEECCHHHHHHHHHCHHHCCCCCCCC
>Mature Secondary Structure 
ARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTA
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKAASKSTTKSKTASSVKKSSITASKNAKTRSKHTVNKTASANFTEKCTKRKGYKSHCVK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCCHHHHEE
VKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGSSPRTGFDCSGLVYYAYKDL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHH
VKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRT
HEEECCCCHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCHHHEEEEECCCEEEECCCC
GREIQITSLSEDYWQRHYVGARRVMTPKTLR
CCEEEEEECCHHHHHHHHHCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]