| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is lhr [H]
Identifier: 91210867
GI number: 91210867
Start: 1769248
End: 1769391
Strand: Direct
Name: lhr [H]
Synonym: UTI89_C1844
Alternate gene names: 91210867
Gene position: 1769248-1769391 (Clockwise)
Preceding gene: 91210866
Following gene: 91210869
Centisome position: 34.93
GC content: 55.56
Gene sequence:
>144_bases ATGGCAAATAATCCAAACCCTTCATCGCCCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTT TAAACAGCCGACAGCTGTCCAGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGA
Upstream 100 bases:
>100_bases AGGTGTAATCGAGTCGATGCCTGATGACATGCAATGAATCAGGCATCTATAGTGAGGCTATTCTACGCATCATGCATGTT ATTCACGGGGAATAGCGTTA
Downstream 100 bases:
>100_bases CCTACCGGTCCGGCAAACGCCGATGTTTACGCGGTTACGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGG GATAGAGAAAGGACTGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Large helicase-related protein [H]
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MANNPNPSSPLPDVFSPATRDWFLRAFKQPTAVQSRTTAALYANRSE
Sequences:
>Translated_47_residues MANNPNPSSPLPDVFSPATRDWFLRAFKQPTAVQSRTTAALYANRSE >Mature_46_residues ANNPNPSSPLPDVFSPATRDWFLRAFKQPTAVQSRTTAALYANRSE
Specific function: Unknown
COG id: COG1201
COG function: function code R; Lhr-like helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787942, Length=37, Percent_Identity=86.4864864864865, Blast_Score=71, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR014001 - InterPro: IPR013701 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 [H]
Pfam domain/function: PF00270 DEAD; PF08494 DEAD_assoc; PF00271 Helicase_C [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 5223; Mature: 5092
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNPNPSSPLPDVFSPATRDWFLRAFKQPTAVQSRTTAALYANRSE CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHEECCCCC >Mature Secondary Structure ANNPNPSSPLPDVFSPATRDWFLRAFKQPTAVQSRTTAALYANRSE CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on acid anhydrides [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7559321; 9097039; 9278503; 1460056 [H]