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The map label for this gene is ydcP [H]

Identifier: 91210677

GI number: 91210677

Start: 1578262

End: 1580265

Strand: Direct

Name: ydcP [H]

Synonym: UTI89_C1654

Alternate gene names: 91210677

Gene position: 1578262-1580265 (Clockwise)

Preceding gene: 91210676

Following gene: 91210680

Centisome position: 31.16

GC content: 50.6

Gene sequence:

>2004_bases
GTGGCTAAAATAGCCGCCATTTTTCAGCTACTGGATAAGAAAGTGACCGTATCTTCTCATCGTCTTGAACTGTTAAGCCC
GGCACGCGATGCCGCCATTGCCCGCGAAGCTATTTTGCACGGTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTG
CCCGTCATAATGCCAGTAATAGCCTGAAAGATATTGCCGAGTTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTC
GTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGT
CGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTGCG
ATATTCGTACAGTAGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTT
GAGCAGATCCGCGCGATTCACCAGGCCACGGACGCGACCATTGAATTCTTTATTCATGGCGCATTGTGCGTGGCCTATTC
GGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCAT
ACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACATCTGCTGTCGATGAAAGATAACGATCAGACTGCC
AACCTCGGCGCGCTGATTGATGCTGGCGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAA
TATCACCGCCCATTATCGTCAGATGCTGGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTA
CTGAACATTTCTTTGTTCCATCGACGGAAAAGACTTTCCACCGTGGTAGCACAGATTATTTTGTGAATGCCCGTAAAGGC
GATATTGGCGCGTTCGATTCGCCGAAATTTATCGGCCTGCCGGTGGGCGAAGTATTGAAAGTAGCGAAAGATCATATTGA
TGTTGCCGTTACCGAGCCACTGGCAAATGGCGATGGCCTGAACGTGATGATTAAACGTGAAGTCGTCGGTTTTCGTGCCA
ATACGGTAGAGAAAACCGGAGAAAATCAGTACCGCGTCTGGCCCAATGAAATGCCAGCAGATTTGCACAAAATTCGCCCG
CATCACCCACTAAACCGTAATCTTGATCATAACTGGCAGCAGGCACTGACAAAAACCTCCAGCGAACGTCGGGTGGCGGT
AGACATTGAACTGGGCGGCTGGCAGGAACAACTGATTCTGACCCTCACCAGTGAAGAGGGTGTCAGCATCACACATACGC
TGGACGGGCAGTTCGACGAAGCCAATAACGCCGAAAAAGCAATGAACAATCTGAAGGATGGTCTGGCAAAACTGGGGCAA
ACCATCTATTACGCCCGCAATGTGCAAATTAATTTGCCGGGGGCGCTGTTTGTACCAAACAGTCTGTTAAACCAGTTCCG
CCGTGAAGCCGCCGATATGCTTGATGCTGCGCGTCTTGCCAGTTACCAGCGCGGCAGCCGTAAACCGGTTGCTGATCCTG
CGCCAGTTTATCCGCAAACGCATCTGAGTTTCCTCGCGAACGTATACAACCAGAAAGCGCGTGAATTTTATCATCGCTAT
GGTGTGCAACTGATTGACGCGGCGTATGAGGCACATGAAGAGAAGGGCGAAGTCCCGGTGATGATCACCAAGCATTGTCT
GCGCTTTGCCTTCAATCTGTGCCCGAAACAGGCGAAAGGCAATATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTA
ACGGCGATGAAGTATTAACGCTAAAGTTTGATTGCCGCCCATGCGAGATGCACGTCATTGGCAAAATCAAAAATCACATA
CTGAAAATGCCGTTACCGGGAAGCGTAGTGGCATCCGTAAGTCCGGATGATCTGCTGAAAACATTGCCGAAGCGAAAAGG
GTAA

Upstream 100 bases:

>100_bases
GCATGTCTATCGTAATGGTGGAGAGCAAACCGTACATTTTCATTCCCTCATCCATTACCCGCGCAGTTAAGCGGGAAAAC
TATTTCGCAACGTCGCGCTT

Downstream 100 bases:

>100_bases
AACGCCAGTTTTCGGGTTACTCACCACTCATCAAATCTGCATGATATTGCCTGCCGGGTAAGGTGTCACGCCGCATCCGG
CAACACACGACTCAACGCTG

Product: putative protease YdcP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MAKIAAIFQLLDKKVTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIF
VTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNL
EQIRAIHQATDATIEFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTA
NLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYFVNARKG
DIGAFDSPKFIGLPVGEVLKVAKDHIDVAVTEPLANGDGLNVMIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRP
HHPLNRNLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQ
TIYYARNVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRY
GVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHI
LKMPLPGSVVASVSPDDLLKTLPKRKG

Sequences:

>Translated_667_residues
MAKIAAIFQLLDKKVTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIF
VTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNL
EQIRAIHQATDATIEFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTA
NLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYFVNARKG
DIGAFDSPKFIGLPVGEVLKVAKDHIDVAVTEPLANGDGLNVMIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRP
HHPLNRNLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQ
TIYYARNVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRY
GVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHI
LKMPLPGSVVASVSPDDLLKTLPKRKG
>Mature_666_residues
AKIAAIFQLLDKKVTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIFV
TLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLE
QIRAIHQATDATIEFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTAN
LGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYFVNARKGD
IGAFDSPKFIGLPVGEVLKVAKDHIDVAVTEPLANGDGLNVMIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPH
HPLNRNLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQT
IYYARNVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYG
VQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHIL
KMPLPGSVVASVSPDDLLKTLPKRKG

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=653, Percent_Identity=98.7748851454824, Blast_Score=1350, Evalue=0.0,
Organism=Escherichia coli, GI1788397, Length=441, Percent_Identity=29.4784580498866, Blast_Score=138, Evalue=9e-34,
Organism=Escherichia coli, GI1789548, Length=293, Percent_Identity=32.7645051194539, Blast_Score=115, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020988
- InterPro:   IPR001539 [H]

Pfam domain/function: PF12392 DUF3656; PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 74274; Mature: 74142

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIAAIFQLLDKKVTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASN
CHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCH
SLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILEL
HHHHHHHHHHHHHHCCCEEEEEEEEHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEE
DIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLEQIRAIHQATDATIEFFIHG
CCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHEEHHHHH
ALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTA
EEEEEECCCEEEEECCCCCCCCCCCHHHHHCCCCEEECCCCCEEEEHHHHHHCCCCCCCC
NLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVP
CHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECC
STEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLKVAKDHIDVAVTEPLANGDGL
CCHHHHHCCCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHHHHCCEEEECCCCCCCCC
NVMIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTS
EEEEEEEECCCCCCCHHHCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCC
SERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQ
CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
TIYYARNVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQT
CEEEEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
HLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKG
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCC
NIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDDLLK
CCCCCCCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHCEEECCCCCCEEECCCHHHHHH
TLPKRKG
HCCCCCC
>Mature Secondary Structure 
AKIAAIFQLLDKKVTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASN
HHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCH
SLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILEL
HHHHHHHHHHHHHHCCCEEEEEEEEHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEE
DIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLEQIRAIHQATDATIEFFIHG
CCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHEEHHHHH
ALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTA
EEEEEECCCEEEEECCCCCCCCCCCHHHHHCCCCEEECCCCCEEEEHHHHHHCCCCCCCC
NLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVP
CHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECC
STEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLKVAKDHIDVAVTEPLANGDGL
CCHHHHHCCCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHHHHCCEEEECCCCCCCCC
NVMIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTS
EEEEEEEECCCCCCCHHHCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCC
SERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQ
CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
TIYYARNVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQT
CEEEEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
HLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKG
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCC
NIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDDLLK
CCCCCCCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHCEEECCCCCCEEECCCHHHHHH
TLPKRKG
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]