Definition Escherichia coli UTI89 chromosome, complete genome.
Accession NC_007946
Length 5,065,741

Click here to switch to the map view.

The map label for this gene is mdoD [H]

Identifier: 91210668

GI number: 91210668

Start: 1570126

End: 1571781

Strand: Direct

Name: mdoD [H]

Synonym: UTI89_C1645

Alternate gene names: 91210668

Gene position: 1570126-1571781 (Clockwise)

Preceding gene: 91210667

Following gene: 91210669

Centisome position: 30.99

GC content: 50.97

Gene sequence:

>1656_bases
ATGGATCGTAGACGATTTATTAAAGGTTCAATGGCTATGGCCGCCGTGTGCGGTACCAGCGGCATTGCTTCTCTTTTTTC
TCAGGCGGCATTCGCGGCCGATTCTGATATTGCCGACGGGCAAACCCAGCGTTTTGACTTCTCCATTCTACAGTCAATGG
CGCACGACTTAGCGCAAACAGCATGGCGTGGTGCACCACGTCCGTTACCTGACACTTTGGCGACAATGACGCCGCAGGCT
TATAACAGTATTCAATACGACGCCGAAAAATCGCTCTGGCATAACGTTGAGAACCGTCAACTGGACGCTCAGTTTTTCCA
TATGGGAATGGGATTCCGTCGCCGCGTTCGTATGTTTTCTGTAGATCCAGCAACACATCTGGCGCGTGAAATTCACTTTC
GCCCGGAGTTGTTCAAATACAACGATGCGGGTGTGGATACCAAACAATTAGAAGGGCAAAGCGATCTCGGTTTTGCCGGT
TTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTCCTCGGCGCGAGTTATTTCCGCGCCGTTGA
TGACACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGCAAAGAAGAGTTCCCCGACT
TTACCGCCTTCTGGTTTGATACGGTAAAACCAGGGGCAACCACCTTTACCGTTTATGCGTTGCTCGATAGCGCCAGTATT
ACTGGTGCCTATAAGTTCACTATCCATTGTGAGAAAAATCAGGTGATTATGGATGTGGAAAATCACCTGTATGCGCGCAA
AGACATTAAACAGCTGGGCATTGCGCCGATGACCAGTATGTTCAGCTGCGGTACTAATGAACGTCGGATGTGCGACACCA
TTCATCCGCAAATCCATGACTCTGATCGTCTGTCCATGTGGCGGGGCAACGGCGAGTGGATTTGCCGTCCGCTGAACAAT
CCGCAAAAATTGCAGTTCAATGCTTACACCGACAACAACCCGAAAGGGTTTGGTTTATTGCAACTGGATCGTGATTTCTC
CCATTATCAGGACATTATGGGCTGGTATAACAAACGCCCAAGTCTGTGGGTGGAACCGCGTAACAAGTGGGGTAAGGGCA
CCATCGGCCTGATGGAAATCCCAACAACGGGCGAAACGCTGGATAACATTGTCTGCTTCTGGCAGCCAGAAAAAGCTGTA
AAAGCGGGTGATGAGTTTGCATTCCAGTATCGTCTGTACTGGAGTGCGCAACCGCCTGTTCATTGCCCATTAGCGCGCGT
TATGGCGACGCGTACCGGCATGGGCGGTTTCCCGGAAGGTTGGGCGCCAGGTGAACACTATCCCGAAAAATGGGCGCGAC
GTTTTGCCGTCGATTTCGTTGGTGGTGATCTGAAAGCTGCCGCGCCAAAAGGCATTGAGCCGGTGATTACGCTTTCCAGT
GGGGAAGCGAAGCAAATCGAAATTCTCTATATTGAACCCATTGATGGTTATCGTATTCAGTTTGACTGGTATCCGACTTC
GGACTCCACTGATCCGGTCGATATGCGGATGTATCTGCGTTGTCAGGGCGACGCTATCAGTGAAACATGGCTGTATCAGT
ATTTCCCGCCAGCGCCGGATAAACGTCAGTATGTTGATGACCGCGTGATGAGTTAA

Upstream 100 bases:

>100_bases
AATATTGTCTAGAGTGAGCGGTCATAAATAAGCACTTTCTTGCCGCTGAAAATGACCAGCGCGGGACCATTCACAACACC
AGAAGGACTCACTTTCAGGT

Downstream 100 bases:

>100_bases
TCGTTTTTTCTTCGGCATCTTCTTCGGGAGGTGCCGTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAAT
GAGTAATCTGATGGTGTGTA

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQA
YNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASI
TGAYKFTIHCEKNQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNN
PQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVCFWQPEKAV
KAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSS
GEAKQIEILYIEPIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS

Sequences:

>Translated_551_residues
MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQA
YNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASI
TGAYKFTIHCEKNQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNN
PQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVCFWQPEKAV
KAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSS
GEAKQIEILYIEPIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS
>Mature_551_residues
MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQA
YNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASI
TGAYKFTIHCEKNQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNN
PQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVCFWQPEKAV
KAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSS
GEAKQIEILYIEPIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS

Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI145693128, Length=551, Percent_Identity=99.6370235934664, Blast_Score=1151, Evalue=0.0,
Organism=Escherichia coli, GI1787286, Length=505, Percent_Identity=37.4257425742574, Blast_Score=308, Evalue=6e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 62796; Mature: 62796

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQT
CCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFS
HHCCCCCCCCHHHHHCCHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEEE
VDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARRDVVSFLGA
CCHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCCHHHEEEECCHHHHHHHHHHHHHH
SYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASI
HHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCEEEEEHHCCCCCCCEEEEEEEECCCCC
TGAYKFTIHCEKNQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHD
CEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCCCCCC
SDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRP
CCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCC
SLWVEPRNKWGKGTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRLYWSAQPPV
CEEECCCCCCCCCCEEEEECCCCCCCHHCEEEEECCCHHHHCCCCEEEEEEEEECCCCCC
HCPLARVMATRTGMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSS
CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECC
GEAKQIEILYIEPIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPD
CCCEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCC
KRQYVDDRVMS
HHHHHHHHHCC
>Mature Secondary Structure
MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQT
CCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFS
HHCCCCCCCCHHHHHCCHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEEE
VDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARRDVVSFLGA
CCHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCCHHHEEEECCHHHHHHHHHHHHHH
SYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASI
HHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCEEEEEHHCCCCCCCEEEEEEEECCCCC
TGAYKFTIHCEKNQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHD
CEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCCCCCC
SDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRP
CCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCC
SLWVEPRNKWGKGTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRLYWSAQPPV
CEEECCCCCCCCCCEEEEECCCCCCCHHCEEEEECCCHHHHCCCCEEEEEEEEECCCCCC
HCPLARVMATRTGMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSS
CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECC
GEAKQIEILYIEPIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPD
CCCEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCC
KRQYVDDRVMS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA