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The map label for this gene is ynbD [H]

Identifier: 91210656

GI number: 91210656

Start: 1555710

End: 1557101

Strand: Direct

Name: ynbD [H]

Synonym: UTI89_C1633

Alternate gene names: 91210656

Gene position: 1555710-1557101 (Clockwise)

Preceding gene: 91210655

Following gene: 162138443

Centisome position: 30.71

GC content: 49.64

Gene sequence:

>1392_bases
ATGATGCCGGATTCGATAAATGCACACAACGGATTGATGTGTGGGGCATTTTTACGGTTTCGATGGCGGTGCGTCGTGAT
AACTGAACGCCGGAACGTATTGCTACAAGGAGCTGGCTGGTTATTGTTGCTGGCCCCGTTTTTCTTCTTTACATATGGAT
TTCTTAATCAGTTCACCGCGACTCAGGATCTTAACAACCATGATATCCCCAGTCAGGTATTCGGTTGGGAAACGGCGATC
CCTTTTCTTCCCTGGACTATTGTTCCTTACTGGAGTCTGGATCTTTTATATGGATTTTCGCTGTTCATTTGTAGCTCGAC
ATTCGAACAGCGCCGACTGGTTCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTTCTCTATCCGCTGA
AGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACAGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTAT
AACCAGTCTCCTTCGCTGCATATTATTCTCTGCTGGCTACTTTGGCGTCACTTTCGTCAGCATCTGGCTGTGAGGTGGCG
TAAAGTCTGCGGCGGATGGTTTTTACTCATCGCCATTTCGACGCTGACGACCTGGCAGCATCATTTTATTGATGTCATCA
CGGGGCTGGCGGTAGGTATGTTAATTGACTGGATGGTGCCCGTCGACCGTCGTTGGAATTATCAGAAACCTGATCAACGT
CGAATCAAAATAGCACTGCCATATGTCGCAGGCGCGTGCTCGTGCATTGTGTTGATGGAGCTAATGATAATGCTTCAGTT
ATGGTGGTCAGTCTGGTTATGTTGGCCAGTATTATCGCTATTCATCATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAA
CAACAGGGAAAGATAGTCAGGGGAAACTCCCGCCCGCCGTTTACTGGCTGACATTGCCCTGGCGTATCGGGATGTGGCTG
TCTATGCGTTGGTTTTGTCTTCGCCTGGAGCCGGTGAGCAAAATTACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACA
TATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCGACAAAAGATCGACTCTATTTTT
GTGTACCGATGTTGGATCGGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAA
GAGCAAGGCAGCGTTCTGGTCCATTGCGCGTTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGCTGTTATGTTA
CGGACATTGTAAAACCGTTGATGAAGCGATTAGTTATATTCGAGCCAGACGCTCGCGGATTGTGCTTAAGGAAGAGCACA
AAGCGATGCTGAAATTATGGGAAAACAGGTAA

Upstream 100 bases:

>100_bases
CCACAACTGGAGCTGATTGCCGGGGTGTTAACCAGTCATAAAGATGGTAAACCGTGGGTAATGCGCGTGCGTTCGCAAGG
GGAGATGGATTCGCTCGTGC

Downstream 100 bases:

>100_bases
GCGGATTGAGATGTGGACTGAATATCTACAGTCCACATCAAGATCGTGTCCGGTTATGCAGCAACAATACTGTCGATGGC
TGCTTTCGCGTCAGACTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MMPDSINAHNGLMCGAFLRFRWRCVVITERRNVLLQGAGWLLLLAPFFFFTYGFLNQFTATQDLNNHDIPSQVFGWETAI
PFLPWTIVPYWSLDLLYGFSLFICSSTFEQRRLVHRLILATVMACCGFFLYPLKFSFIRPEVSGVTGWLFSQLELFDLPY
NQSPSLHIILCWLLWRHFRQHLAVRWRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQR
RIKIALPYVAGACSCIVLMELMIMLQLWWSVWLCWPVLSLFIIGRGYGGLGAITTGKDSQGKLPPAVYWLTLPWRIGMWL
SMRWFCLRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTFEFPRGRATKDRLYFCVPMLDRVVPEEGELRQAVAMLETLRE
EQGSVLVHCALGLSRSALVVAAWLLCYGHCKTVDEAISYIRARRSRIVLKEEHKAMLKLWENR

Sequences:

>Translated_463_residues
MMPDSINAHNGLMCGAFLRFRWRCVVITERRNVLLQGAGWLLLLAPFFFFTYGFLNQFTATQDLNNHDIPSQVFGWETAI
PFLPWTIVPYWSLDLLYGFSLFICSSTFEQRRLVHRLILATVMACCGFFLYPLKFSFIRPEVSGVTGWLFSQLELFDLPY
NQSPSLHIILCWLLWRHFRQHLAVRWRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQR
RIKIALPYVAGACSCIVLMELMIMLQLWWSVWLCWPVLSLFIIGRGYGGLGAITTGKDSQGKLPPAVYWLTLPWRIGMWL
SMRWFCLRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTFEFPRGRATKDRLYFCVPMLDRVVPEEGELRQAVAMLETLRE
EQGSVLVHCALGLSRSALVVAAWLLCYGHCKTVDEAISYIRARRSRIVLKEEHKAMLKLWENR
>Mature_463_residues
MMPDSINAHNGLMCGAFLRFRWRCVVITERRNVLLQGAGWLLLLAPFFFFTYGFLNQFTATQDLNNHDIPSQVFGWETAI
PFLPWTIVPYWSLDLLYGFSLFICSSTFEQRRLVHRLILATVMACCGFFLYPLKFSFIRPEVSGVTGWLFSQLELFDLPY
NQSPSLHIILCWLLWRHFRQHLAVRWRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQR
RIKIALPYVAGACSCIVLMELMIMLQLWWSVWLCWPVLSLFIIGRGYGGLGAITTGKDSQGKLPPAVYWLTLPWRIGMWL
SMRWFCLRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTFEFPRGRATKDRLYFCVPMLDRVVPEEGELRQAVAMLETLRE
EQGSVLVHCALGLSRSALVVAAWLLCYGHCKTVDEAISYIRARRSRIVLKEEHKAMLKLWENR

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein-tyrosine phosphatase family [H]

Homologues:

Organism=Escherichia coli, GI1787679, Length=430, Percent_Identity=94.6511627906977, Blast_Score=811, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000387
- InterPro:   IPR000340
- InterPro:   IPR020422
- InterPro:   IPR000326
- InterPro:   IPR016130 [H]

Pfam domain/function: PF00782 DSPc; PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 53646; Mature: 53646

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPDSINAHNGLMCGAFLRFRWRCVVITERRNVLLQGAGWLLLLAPFFFFTYGFLNQFTA
CCCCCCCCCCCCHHHHHHHEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
TQDLNNHDIPSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFICSSTFEQRRLVHRLILA
HCCCCCCCCCHHHCCCHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVMACCGFFLYPLKFSFIRPEVSGVTGWLFSQLELFDLPYNQSPSLHIILCWLLWRHFRQ
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHH
HLAVRWRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQR
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RIKIALPYVAGACSCIVLMELMIMLQLWWSVWLCWPVLSLFIIGRGYGGLGAITTGKDSQ
EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC
GKLPPAVYWLTLPWRIGMWLSMRWFCLRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTFE
CCCCCEEEEEEECHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
FPRGRATKDRLYFCVPMLDRVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSALVV
CCCCCCCCCHHEEHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
AAWLLCYGHCKTVDEAISYIRARRSRIVLKEEHKAMLKLWENR
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMPDSINAHNGLMCGAFLRFRWRCVVITERRNVLLQGAGWLLLLAPFFFFTYGFLNQFTA
CCCCCCCCCCCCHHHHHHHEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
TQDLNNHDIPSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFICSSTFEQRRLVHRLILA
HCCCCCCCCCHHHCCCHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVMACCGFFLYPLKFSFIRPEVSGVTGWLFSQLELFDLPYNQSPSLHIILCWLLWRHFRQ
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHH
HLAVRWRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQR
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RIKIALPYVAGACSCIVLMELMIMLQLWWSVWLCWPVLSLFIIGRGYGGLGAITTGKDSQ
EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC
GKLPPAVYWLTLPWRIGMWLSMRWFCLRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTFE
CCCCCEEEEEEECHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
FPRGRATKDRLYFCVPMLDRVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSALVV
CCCCCCCCCHHEEHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
AAWLLCYGHCKTVDEAISYIRARRSRIVLKEEHKAMLKLWENR
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]