| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is ycjM [H]
Identifier: 91210602
GI number: 91210602
Start: 1489503
End: 1491209
Strand: Direct
Name: ycjM [H]
Synonym: UTI89_C1579
Alternate gene names: 91210602
Gene position: 1489503-1491209 (Clockwise)
Preceding gene: 91210601
Following gene: 91210604
Centisome position: 29.4
GC content: 44.0
Gene sequence:
>1707_bases ATGGGACCGCTACCACGGAAAGGCAACATGAAACAGAAAATTACGGATTACCTGGACGAAATCTACGGTGGAACATTTAC CGCGACTCATTTACAGAAACTTGTAACGCGTCTTGAGAGTGCGAAACGATTAATTACACAGCGACGTAAAAAACACTGGG ATGAAAGTGATGTCGTGTTAATTACCTATGCCGATCAATTTCACAGTAATGATTTAAAGCCACTACCCACATTTAATCAG TTTTACCCTCAATGGCTGCAAAGAATTTTTTCACATGTTCATTTATTACCTTTTTATCCATGGTCATCTGATGATGGATT TTCGGTAATTGATTATCATCAGGTCGCCAGTGAAGCGGGGGAGTGGCAGGATATTCAGCAACTCGGTGAATGCAGCCATT TAATGTTTGATTTTGTCTGCAACCATATGTCGGCAAAAAGTGAATGGTTTAAAAACTATTTACAACAGCAGCCAGGTTTT GAAGATTTTTTTATTGCCGTTGATCCGAAAACCGATCTCAGCGCCGTCACTCGCCCGCGTGCGTTACCGTTATTAACGCC ATTCCAGATGCGCGATCATTCAATGCGCCATTTATGGACCACCTTTAGCGACGATCAAATTGACCTCAATTACCGTAGCC CTGAAGTGTTGCTGGCGATGGTGGATGTATTGCTGTGCTACCTGGAAAAGGGCGCAGAGTATGTCCGTCTGGATGCCGTT GGCTTTATGTGGAAAGAGCCGGGAACAAACTGCATCCATCTGGAAAAAACACATCTGATTATCAAACTGTTACGGTCGAT TATTGATAACGTCGCGCCAGGCACAGTGATCATTACCGAGACCAATGTTCCGCATAAAGACAACATTGCTTACTTTGGCG AAGGCGATGACGAAGCGCATATGGTGTACCAGTTCTCGCTGCCGCCGCTGGTGCTGCATGCGGTGCAAAAACAGAACGTT GAGGCACTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTTGCCTCTCACGA TGGCATCGGGCTTAACCCACTGCGGGGGTTGTTGCCCGAAAACGAAATATTAGCGCTGGTCGAGGTGTTACAGCAGGAAG GAGCATTAGTAAACTGGAAAAATAATCCCGACGGTACGCGTAGCCCCTATGAAATGAATGTCACCTATATGGATGCGTTG AGCCGCCGTGAGTGTAGCGACGAAGAACGGTGTGCCAGGTTTATTCTCGCCCATGCGATTTTGTTAAGTTTCCCCGGTGT GCCAGCGATATATATTCAAAGCATTCTGGGGTCGCGTAATGATTACGCAGGTGTCGAAAAACTTGGATATAATCGTGCGA TTAACCGTAAAAAATACTCTAGTAAAGAGATAACGACAGAACTGAACAATAAAGCGACATTAAGTTATTCGGTATATTAT AAGTTGTCGCATTTAATTACACTTCGTCGCAGTCATAAAGAGTTTCATCCGGATAATAATTTCACCATTGATGCGATTAA TTCATTTGTAATGCGAATTCAAAGAAGCAATGCGGATGGCGATTGCCTGACGGGATTGTTTAATGTCAGTGAAAATATTC AGCATATAAATATTACTGACCTGCACGGTCGGGATCTGATTAGTGAAGTTGATATATTGGGTAATGAAATAACACTGCAT CCCTGGCAGGTTATGTGGATTAAATAA
Upstream 100 bases:
>100_bases CACAAATACGCTTTTTCCCAGGTAAAAAAAGATTTCCTGCGTGACTAAACCCCTTGAGCTCAATTGACAGTTTATTTTAT GCGGAGTAGTCTCTCGTTTC
Downstream 100 bases:
>100_bases AAAGGAACATTTCATGATTAAATCAAAAATCGTGCTGTTATCAGCACTGGTTTCCTGCACCCTGATTTCAGGCTGTAAAG AAGAAAATAAAAATAATGTA
Product: putative sucrose phosphorylase
Products: NA
Alternate protein names: Sucrose glucosyltransferase [H]
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MGPLPRKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVLITYADQFHSNDLKPLPTFNQ FYPQWLQRIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAGEWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQQPGF EDFFIAVDPKTDLSAVTRPRALPLLTPFQMRDHSMRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLEKGAEYVRLDAV GFMWKEPGTNCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGEGDDEAHMVYQFSLPPLVLHAVQKQNV EALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPENEILALVEVLQQEGALVNWKNNPDGTRSPYEMNVTYMDAL SRRECSDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYSSKEITTELNNKATLSYSVYY KLSHLITLRRSHKEFHPDNNFTIDAINSFVMRIQRSNADGDCLTGLFNVSENIQHINITDLHGRDLISEVDILGNEITLH PWQVMWIK
Sequences:
>Translated_568_residues MGPLPRKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVLITYADQFHSNDLKPLPTFNQ FYPQWLQRIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAGEWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQQPGF EDFFIAVDPKTDLSAVTRPRALPLLTPFQMRDHSMRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLEKGAEYVRLDAV GFMWKEPGTNCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGEGDDEAHMVYQFSLPPLVLHAVQKQNV EALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPENEILALVEVLQQEGALVNWKNNPDGTRSPYEMNVTYMDAL SRRECSDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYSSKEITTELNNKATLSYSVYY KLSHLITLRRSHKEFHPDNNFTIDAINSFVMRIQRSNADGDCLTGLFNVSENIQHINITDLHGRDLISEVDILGNEITLH PWQVMWIK >Mature_567_residues GPLPRKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVLITYADQFHSNDLKPLPTFNQF YPQWLQRIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAGEWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQQPGFE DFFIAVDPKTDLSAVTRPRALPLLTPFQMRDHSMRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLEKGAEYVRLDAVG FMWKEPGTNCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGEGDDEAHMVYQFSLPPLVLHAVQKQNVE ALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPENEILALVEVLQQEGALVNWKNNPDGTRSPYEMNVTYMDALS RRECSDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYSSKEITTELNNKATLSYSVYYK LSHLITLRRSHKEFHPDNNFTIDAINSFVMRIQRSNADGDCLTGLFNVSENIQHINITDLHGRDLISEVDILGNEITLHP WQVMWIK
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sucrose phosphorylase family [H]
Homologues:
Organism=Escherichia coli, GI87081873, Length=559, Percent_Identity=94.2754919499105, Blast_Score=1103, Evalue=0.0, Organism=Drosophila melanogaster, GI24583747, Length=171, Percent_Identity=30.9941520467836, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI24583749, Length=171, Percent_Identity=30.9941520467836, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI24583745, Length=153, Percent_Identity=31.3725490196078, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45549022, Length=294, Percent_Identity=23.469387755102, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI221330053, Length=166, Percent_Identity=28.3132530120482, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR016377 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =2.4.1.7 [H]
Molecular weight: Translated: 65307; Mature: 65176
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPLPRKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVL CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE ITYADQFHSNDLKPLPTFNQFYPQWLQRIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAG EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEHHHHHHHCCC EWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQQPGFEDFFIAVDPKTDLSAVTRPR CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCC ALPLLTPFQMRDHSMRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLEKGAEYVRLDAV CCCCCCCHHHCCCCHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE GFMWKEPGTNCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGEGDDEAH EEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCE MVYQFSLPPLVLHAVQKQNVEALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPE EEEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCHHHHCCCC NEILALVEVLQQEGALVNWKNNPDGTRSPYEMNVTYMDALSRRECSDEERCARFILAHAI HHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHH LLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYSSKEITTELNNKATLSYSVYY HHHCCCCHHHHHHHHHCCCCCCCHHHHHCCHHHCCCCCCCCHHHHHHCCCCEEEEEEHHH KLSHLITLRRSHKEFHPDNNFTIDAINSFVMRIQRSNADGDCLTGLFNVSENIQHINITD HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC LHGRDLISEVDILGNEITLHPWQVMWIK CCCHHHHHHHHHCCCEEEECCEEEEEEC >Mature Secondary Structure GPLPRKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVL CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE ITYADQFHSNDLKPLPTFNQFYPQWLQRIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAG EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEHHHHHHHCCC EWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQQPGFEDFFIAVDPKTDLSAVTRPR CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCC ALPLLTPFQMRDHSMRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLEKGAEYVRLDAV CCCCCCCHHHCCCCHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE GFMWKEPGTNCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGEGDDEAH EEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCE MVYQFSLPPLVLHAVQKQNVEALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPE EEEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCHHHHCCCC NEILALVEVLQQEGALVNWKNNPDGTRSPYEMNVTYMDALSRRECSDEERCARFILAHAI HHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHH LLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYSSKEITTELNNKATLSYSVYY HHHCCCCHHHHHHHHHCCCCCCCHHHHHCCHHHCCCCCCCCHHHHHHCCCCEEEEEEHHH KLSHLITLRRSHKEFHPDNNFTIDAINSFVMRIQRSNADGDCLTGLFNVSENIQHINITD HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC LHGRDLISEVDILGNEITLHPWQVMWIK CCCHHHHHHHHHCCCEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]