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The map label for this gene is rzpD [H]

Identifier: 91210515

GI number: 91210515

Start: 1408089

End: 1408553

Strand: Direct

Name: rzpD [H]

Synonym: UTI89_C1492

Alternate gene names: 91210515

Gene position: 1408089-1408553 (Clockwise)

Preceding gene: 91210514

Following gene: 91210518

Centisome position: 27.8

GC content: 52.69

Gene sequence:

>465_bases
ATGAACCGCGTACTGTGCGTGGTCATCATTGCCCTGCTGGTGGCCTGTGGTGCGCTTAGTCTGGGGCTGAATCATTACCG
TGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATGTCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACA
TGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGAT
GCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCAC
CGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGCGCGAC
TGATAATAATGCAAAAACAACTTGAAGGGGCACAGCTATACATTCGAGAGCAATGCCTCAGATAA

Upstream 100 bases:

>100_bases
ATGGCTGAAAAATTATCCACCTGGAAGTTCATTCTTATCTGGCTGGTGTTTGTGATTATGGCCTCTGGTTATTTCATCGG
TCAGATACGCTGGTGGTGAA

Downstream 100 bases:

>100_bases
AAACCGGCCAAGGATAATCCGCTGAAGATTCGCCGGTGGCTAAAGTGTGCCAAGAGTTCAATTTACGCAATTACTCCTGT
CGATGCTATGTACCGTCTTT

Product: bacteriophage lambda cell lysis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAITDMQMRQRDVAALDAKYTKELADAKAEND
ALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRARLIIMQKQLEGAQLYIREQCLR

Sequences:

>Translated_154_residues
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAITDMQMRQRDVAALDAKYTKELADAKAEND
ALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRARLIIMQKQLEGAQLYIREQCLR
>Mature_154_residues
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAITDMQMRQRDVAALDAKYTKELADAKAEND
ALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRARLIIMQKQLEGAQLYIREQCLR

Specific function: Necessary for host cell lysis. It is believed to code for an endopeptidase that cleaves the amino-carboxyl cross-link between the diaminopimelic acid and D-alanine residues in the murein component of the bacterial cell wall [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786769, Length=152, Percent_Identity=82.8947368421053, Blast_Score=250, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004929 [H]

Pfam domain/function: PF03245 Phage_lysis [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 17202; Mature: 17202

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAITDMQMRQRD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DTAERDYFTLRARLIIMQKQLEGAQLYIREQCLR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAITDMQMRQRD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DTAERDYFTLRARLIIMQKQLEGAQLYIREQCLR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]