| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
Click here to switch to the map view.
The map label for this gene is arrQ [H]
Identifier: 91210513
GI number: 91210513
Start: 1407257
End: 1407790
Strand: Direct
Name: arrQ [H]
Synonym: UTI89_C1490
Alternate gene names: 91210513
Gene position: 1407257-1407790 (Clockwise)
Preceding gene: 91210511
Following gene: 91210514
Centisome position: 27.78
GC content: 53.18
Gene sequence:
>534_bases ATGAACGCAAAAATCAAATACGGCCTGTCAGCTGCAGTTCTGGCGCTGATTGGAGCAGGCGCATCAGCTCCTCAGATACT TGACCAGTTTCTGGATGAAAAAGAGGGTAACCACACTACGGCATACCGCGATGGTTCCGGCAACTGGACCATCTGTCGGG GGGCCACGATGGTGGATGGAAAACCCGTTTTTCCCGGTATGAAACTGTCGAAGGAAAAATGCGACCAGGTCAACGCCATT GAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCATTGAGCGAACCCCAGAAAGCGGGGATCGCGTC ATTCTGTCCGTACAACATTGGTCCCGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAATTAATGCAGGTGATCGCAGGG GAGCGTGTGAGGCGATTCGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCGTATTCGTTCAAACAACTGCTACGGTCAG GTATCCCGTCGTGACCAGGAGAGCGCGCTGGCGTGCTGGGGTATCGACAGATAA
Upstream 100 bases:
>100_bases ATCCTCTTGATTGTCTTTACCTTTTCCCCGCCTGATTCAACAGGCCGGGACAGATAAACATATCCAGGGTTCAGAAACCG ATAAATCCTGATAAATATCC
Downstream 100 bases:
>100_bases GCAGAATATTTTGCTGAAAAATAAGGCATGGCCACGCGGGCGGATAACATGAAATCCTGCGAAGTGGCGAAACGTAAGTG AATAAAAGTAAAAACCCCGT
Product: putative phage lysozyme
Products: NA
Alternate protein names: Endolysin; Lysis protein; Muramidase [H]
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MNAKIKYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTTAYRDGSGNWTICRGATMVDGKPVFPGMKLSKEKCDQVNAI ERDKALAWVEKNIKVPLSEPQKAGIASFCPYNIGPGKCFPSTFYKRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ VSRRDQESALACWGIDR
Sequences:
>Translated_177_residues MNAKIKYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTTAYRDGSGNWTICRGATMVDGKPVFPGMKLSKEKCDQVNAI ERDKALAWVEKNIKVPLSEPQKAGIASFCPYNIGPGKCFPSTFYKRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ VSRRDQESALACWGIDR >Mature_177_residues MNAKIKYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTTAYRDGSGNWTICRGATMVDGKPVFPGMKLSKEKCDQVNAI ERDKALAWVEKNIKVPLSEPQKAGIASFCPYNIGPGKCFPSTFYKRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ VSRRDQESALACWGIDR
Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]
COG id: COG3772
COG function: function code R; Phage-related lysozyme (muraminidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 24 family [H]
Homologues:
Organism=Escherichia coli, GI1787836, Length=177, Percent_Identity=91.5254237288136, Blast_Score=342, Evalue=9e-96, Organism=Escherichia coli, GI1786768, Length=143, Percent_Identity=31.4685314685315, Blast_Score=74, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002196 [H]
Pfam domain/function: PF00959 Phage_lysozyme [H]
EC number: =3.2.1.17 [H]
Molecular weight: Translated: 19490; Mature: 19490
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKIKYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTTAYRDGSGNWTICRGATMVDG CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCEEECC KPVFPGMKLSKEKCDQVNAIERDKALAWVEKNIKVPLSEPQKAGIASFCPYNIGPGKCFP CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH STFYKRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR HHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCCEEEECCCCC >Mature Secondary Structure MNAKIKYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTTAYRDGSGNWTICRGATMVDG CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCEEECC KPVFPGMKLSKEKCDQVNAIERDKALAWVEKNIKVPLSEPQKAGIASFCPYNIGPGKCFP CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH STFYKRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR HHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]