| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is chaC [H]
Identifier: 91210441
GI number: 91210441
Start: 1346719
End: 1347450
Strand: Direct
Name: chaC [H]
Synonym: UTI89_C1414
Alternate gene names: 91210441
Gene position: 1346719-1347450 (Clockwise)
Preceding gene: 91210440
Following gene: 91210443
Centisome position: 26.58
GC content: 55.05
Gene sequence:
>732_bases TTGTCGCAGGGAAGTATGCAGTGGCGGAGGTGTAAGGTGATAACGCGTGATTTCTTGATGAATGCCGATTGTAAAACGGC ATTTGGTGCCATTGAAGAATCACTCTTATGGTCAGCAGAACAACGGGCGGCTTCGCTGGCGGCGACGCTGGCTTGTCGAC CTGATGAGGGACCGGTGTGGATCTTCGGTTATGGATCGTTGATGTGGAATCCGGCACTGGAGTTTACCGAGTCGTGCACC GGTACACTGGTTGGATGGCATCGCGCGTTTTGCCTGCGCCTGACCGCCGGGCGCGGGACTGCGCACCAGCCGGGACGAAT GCTTGCACTGAAAGAGGGCGGACGCACCACAGGCGTCGCCTATCGACTGCCAGAAGAGACGCTGGAGCAGGAACTAACCC TGCTGTGGAAGCGCGAGATGATTACCGGCTGTTATCTGCCAACCTGGTGTCAGCTTGATCTTGATGATGGACGCACAGTA AACGCCATTGTGTTTATTATGGACCCGCGACATCCAGAATATGAATCTGACACTCGCGCTCAGGTCATAGCGCCGTTGAT TGCGGCGGCGAGCGGTCCGCTGGGAACCAATGCACAATACCTGTTTTCACTGGAACAGGAGCTTATCAAACTGGGAATGC AGGACGATGGGCTGAATGAATTGCTGGTATCGGTAAAAAAACTGCTGGCGGAGAATTATCCGGATGGTGTGTTACGGCCG GGATTCGCCTGA
Upstream 100 bases:
>100_bases TATTCGTGCGGTGTTGCCTTGCAAGTGGTCCGTGGATTGCATATTGTCCCGTTAGTGGTTTCAAAATGAGCAGTAAAAAT GTCCGGAAGACACCAAAAAG
Downstream 100 bases:
>100_bases GTAAACTTTCCTCATAGTGGGGCGTCAGACGCCCCCTCAAACATTAAAATGTGAGCACTTTATCGGCTGACAGCGTCCAT TGCGCCAGTTCAACAAGAGT
Product: cation transport protein ChaC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSQGSMQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCT GTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTV NAIVFIMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNELLVSVKKLLAENYPDGVLRP GFA
Sequences:
>Translated_243_residues MSQGSMQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCT GTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTV NAIVFIMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNELLVSVKKLLAENYPDGVLRP GFA >Mature_242_residues SQGSMQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTG TLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVN AIVFIMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNELLVSVKKLLAENYPDGVLRPG FA
Specific function: Unknown
COG id: COG3703
COG function: function code P; Uncharacterized protein involved in cation transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaC family [H]
Homologues:
Organism=Homo sapiens, GI218563698, Length=182, Percent_Identity=32.967032967033, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI56790287, Length=177, Percent_Identity=32.2033898305085, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI145693119, Length=231, Percent_Identity=98.7012987012987, Blast_Score=471, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17560078, Length=186, Percent_Identity=30.1075268817204, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641578, Length=188, Percent_Identity=30.8510638297872, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI45553467, Length=211, Percent_Identity=30.3317535545024, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24649389, Length=211, Percent_Identity=30.3317535545024, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24649391, Length=211, Percent_Identity=30.3317535545024, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24649393, Length=211, Percent_Identity=30.3317535545024, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013024 - InterPro: IPR006840 [H]
Pfam domain/function: PF04752 ChaC [H]
EC number: NA
Molecular weight: Translated: 26990; Mature: 26859
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGSMQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVW CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEE IFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVA EEEECCCCCCCHHHHHHCCCHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCEE YRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHPEYESDTRA EECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHH QVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNELLVSVKKLLAENYPDGVLRP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC GFA CCC >Mature Secondary Structure SQGSMQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVW CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEE IFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVA EEEECCCCCCCHHHHHHCCCHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCEE YRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHPEYESDTRA EECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHH QVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNELLVSVKKLLAENYPDGVLRP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC GFA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]