| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is 91210349
Identifier: 91210349
GI number: 91210349
Start: 1270392
End: 1271162
Strand: Direct
Name: 91210349
Synonym: UTI89_C1322
Alternate gene names: NA
Gene position: 1270392-1271162 (Clockwise)
Preceding gene: 91210348
Following gene: 91210350
Centisome position: 25.08
GC content: 57.46
Gene sequence:
>771_bases ATGTCATTACCTATGAAATGTGAGGACGATATGCCAACACCAAATCCTCTGGCACCGGTGAAAGGGGCCGGGACCACACT GTGGGTTTATAACGGGAGCGGCGACCCTTATGCAAACCCGCTTTCAGACAATGACTGGTCGCGTCTGGCAAAAATTAAAG ACCTGACGCCCGGCGAACTGACCGCTGAGTCCTATGACGACAGTTATCTCGATGATGAAGATGCGGACTGGACCGCGACC GGGCAGGGGCAGAAATCCGCCGGAGATACCAGCTTCACGCTGGCGTGGATGCCCGGAGAGCAGGGGCAGCAGGCGCTGCT GGCGTGGTTTAATGAAGGTGATACCCGTGCCTATAAAATCCGCTTCCCGAACGGCACGGTCGATGTGTTCCGTGGCTGGG TCAGCAGTATCGGTAAGGCGGTGACGGCGAAGGAAGTGATCACCCGTACGGTGAAGGTCACCAATGTGGGCCGTCCGTCA ATGGCAGAAGATCGCAGTACGGTGACGGCGGCAACCGGTATGACCGTGACGCCTGCCAGCTCCTCGGTGGTGAAAGGGCA GAGCACCACGCTGACCGTGGCCTTCCAGCCGGAGGGCGCAACTGACAAGAGCTTCCGTGCGGTGTCAGCGGATAAAACAA AAGCCACCGTGTCGGTCAGTGGTATGACCATCACCGTGAACGGCGTTGCTGCAGGCAAGGTCAACATTCCGGTTGTATCC GGTAATGGTGAACTTGCTGCGGTTGCAGAAATCACTGTCACCGACAGTTAA
Upstream 100 bases:
>100_bases ATCCCGGCACTGTCAGATTTGATCACCAGTATGGTGGCCAGTGGCTATGACTACCGGCGCGACGATGATGCGGGCCTGTG GAGTTCAGCCGATCTGACTT
Downstream 100 bases:
>100_bases TCCGGAGAGTCAGCGATGTTCCTGAAAACCGAATCATTTGAACATAACGGCGTGACCGTCACGCTTTCTGAACTGTCAGC CCTGCAGCGTATTGAGCATC
Product: putative tail component of prophage CP-933X
Products: NA
Alternate protein names: Gifsy-2 Prophage VmtV; Tail Protein; Tail-Like Protein; Ig Domain-Containing Domain-Containing Protein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSLPMKCEDDMPTPNPLAPVKGAGTTLWVYNGSGDPYANPLSDNDWSRLAKIKDLTPGELTAESYDDSYLDDEDADWTAT GQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPS MAEDRSTVTAATGMTVTPASSSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVNGVAAGKVNIPVVS GNGELAAVAEITVTDS
Sequences:
>Translated_256_residues MSLPMKCEDDMPTPNPLAPVKGAGTTLWVYNGSGDPYANPLSDNDWSRLAKIKDLTPGELTAESYDDSYLDDEDADWTAT GQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPS MAEDRSTVTAATGMTVTPASSSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVNGVAAGKVNIPVVS GNGELAAVAEITVTDS >Mature_255_residues SLPMKCEDDMPTPNPLAPVKGAGTTLWVYNGSGDPYANPLSDNDWSRLAKIKDLTPGELTAESYDDSYLDDEDADWTATG QGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSM AEDRSTVTAATGMTVTPASSSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVNGVAAGKVNIPVVSG NGELAAVAEITVTDS
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26897; Mature: 26766
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPMKCEDDMPTPNPLAPVKGAGTTLWVYNGSGDPYANPLSDNDWSRLAKIKDLTPGEL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCE TAESYDDSYLDDEDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKI ECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEE RFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTAATGMTVTPAS ECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCEECCCC SSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVNGVAAGKVNIPVVS CCEEECCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCEEEEEECEEECEEEEEEEC GNGELAAVAEITVTDS CCCCEEEEEEEEEECC >Mature Secondary Structure SLPMKCEDDMPTPNPLAPVKGAGTTLWVYNGSGDPYANPLSDNDWSRLAKIKDLTPGEL CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCE TAESYDDSYLDDEDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKI ECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEE RFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTAATGMTVTPAS ECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCEECCCC SSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVNGVAAGKVNIPVVS CCEEECCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCEEEEEECEEECEEEEEEEC GNGELAAVAEITVTDS CCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA