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The map label for this gene is rzpD [H]

Identifier: 91210331

GI number: 91210331

Start: 1258910

End: 1259383

Strand: Direct

Name: rzpD [H]

Synonym: UTI89_C1304

Alternate gene names: 91210331

Gene position: 1258910-1259383 (Clockwise)

Preceding gene: 91210330

Following gene: 91210333

Centisome position: 24.85

GC content: 51.27

Gene sequence:

>474_bases
GTGGGGTCAGCAATGAACAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGT
TAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGACGCTGGCGAACGCGG
TAATTACTGACATACAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAA
GCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCG
TGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCC
TCAGAGAGAGGCTGATCACTATGCAAAAACAACTGGAAGGAACCCAGAAGTATATTAATGAGCAGTGCAGATAG

Upstream 100 bases:

>100_bases
TCAAAGGCGCATGTGATCAGCTACGTCGCTGGACATATGCTGGCGGTAAGCAATGGAAAGGTCTCATGACTCGTCGTGAG
ATTGAGCGTGAAATCTGTTT

Downstream 100 bases:

>100_bases
AGCTGCCCATATCGATGGGCAACTCATGCAATTATTGTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAA
GTAATAAAACCGAGCAATCC

Product: putative Rz endopeptidase from lambdoid prophage DLP12

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MGSAMNRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELTLANAVITDIQMRQRDVAALDAKYTKELADAK
AENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR

Sequences:

>Translated_157_residues
MGSAMNRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELTLANAVITDIQMRQRDVAALDAKYTKELADAK
AENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR
>Mature_156_residues
GSAMNRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELTLANAVITDIQMRQRDVAALDAKYTKELADAKA
ENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR

Specific function: Necessary for host cell lysis. It is believed to code for an endopeptidase that cleaves the amino-carboxyl cross-link between the diaminopimelic acid and D-alanine residues in the murein component of the bacterial cell wall [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786769, Length=153, Percent_Identity=94.7712418300653, Blast_Score=273, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004929 [H]

Pfam domain/function: PF03245 Phage_lysis [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 17586; Mature: 17455

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSAMNRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELTLANAVITDIQM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHHHHHH
RQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSAMNRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELTLANAVITDIQM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHHHHHH
RQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]