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The map label for this gene is ycfJ [H]

Identifier: 91210265

GI number: 91210265

Start: 1212539

End: 1213117

Strand: Direct

Name: ycfJ [H]

Synonym: UTI89_C1238

Alternate gene names: 91210265

Gene position: 1212539-1213117 (Clockwise)

Preceding gene: 91210264

Following gene: 91210267

Centisome position: 23.94

GC content: 53.02

Gene sequence:

>579_bases
TTGCATGATTGGCATAACAGCAAAGAAGGAGGTATTCCCGTGAATAAGTCAATGTTGGCGGGTATCGGGATTGGTGTCGC
AGCTGCGCTGGGCGTAGCGGCAGTGGCCAGTCTGAACGTGTTTGAACGTGGCCCGCAATACGCTCAGGTTGTTTCTGCAA
CCCCAATCAAGGAAACGGTTAAAACACCGCGTCAGGAGTGTCGCAACGTTACAGTGACCCATCGTCGACCGGTGCAGGAT
GAAAATCGCATTACCGGGTCGGTGCTCGGCGCTGTTGCTGGCGGCGTGATTGGGCATCAGTTTGGTGGTGGTCGCGGTAA
AGATGTCGCCACTGTTGTGGGGGCGCTGGGGGGTGGATATGCAGGTAACCAGATCCAGGGCTCTCTCCAGGAAAGCGATA
CTTACACGACTACGCAACAGCGTTGTAAAACGGTGTATGACAAGTCAGAAAAAATGCTCGGTTATGATGTGACCTATAAG
ATTGGCGATCAGCAGGGCAAAATCCGAATGGACCGCGATCCGGGTACGCAGATCCCGCTAGATAGCAACGGGCAGCTGAT
TTTGAATAACAAAGCATAA

Upstream 100 bases:

>100_bases
GTCGCATCAGGCATTCCTTCAGACTCCTCCGAATCCCTAAGTATTTCCAGCCATTCCCGCGCTTTTCATCTTCTGTCTGA
TAGCTGCTTTTCTCCTTCGC

Downstream 100 bases:

>100_bases
CAAGGTTGTACTCTGCAATTTAGCCCCTCATTCGCTCAAGCTGAGGGGCTTTTTTTGCGACCTATTTCAGCAGTTCCGGC
CATAAACGCAAAGTCGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MHDWHNSKEGGIPVNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQD
ENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYK
IGDQQGKIRMDRDPGTQIPLDSNGQLILNNKA

Sequences:

>Translated_192_residues
MHDWHNSKEGGIPVNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQD
ENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYK
IGDQQGKIRMDRDPGTQIPLDSNGQLILNNKA
>Mature_192_residues
MHDWHNSKEGGIPVNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQD
ENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYK
IGDQQGKIRMDRDPGTQIPLDSNGQLILNNKA

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Rickettsia 17 kDa surface antigen [H]

Homologues:

Organism=Escherichia coli, GI1787353, Length=178, Percent_Identity=99.438202247191, Blast_Score=358, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 20350; Mature: 20350

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDWHNSKEGGIPVNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHH
KTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGY
HHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
AGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPL
CCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCEECEEEEEEECCCCCCEEECCCCCCCCCC
DSNGQLILNNKA
CCCCEEEEECCC
>Mature Secondary Structure
MHDWHNSKEGGIPVNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHH
KTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGY
HHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
AGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPL
CCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCEECEEEEEEECCCCCCEEECCCCCCCCCC
DSNGQLILNNKA
CCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]