| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is tktB [H]
Identifier: 162138397
GI number: 162138397
Start: 2729280
End: 2731283
Strand: Direct
Name: tktB [H]
Synonym: UTI89_C2789
Alternate gene names: 162138397
Gene position: 2729280-2731283 (Clockwise)
Preceding gene: 91211793
Following gene: 91211797
Centisome position: 53.88
GC content: 54.19
Gene sequence:
>2004_bases ATGTCCCGAAAAGACCTTGCCAATGCGATTCGCGCACTCAGTATGGATGCGGTACAAAAAGCCAATTCTGGTCATCCCGG CGCGCCGATGGGCATGGCTGATATTGCCGAAGTGCTGTGGAACGATTTTCTTAAACATAACCCCACCGACCCAACCTGGT ATGACCGTGACCGCTTTATTCTTTCCAACGGTCACGCGTCGATGCTGCTCTACAGTTTGCTGCATCTGACCGGTTACGAC CTGCCACTGGAAGAACTGAAGAACTTCCGTCAGTTGCATTCGAAAACCCCTGGTCACCCGGAAATCGGCTATACGCCAGG TGTTGAAACCACCACCGGTCCTCTTGGACAAGGTTTGGCGAACGCCGTCGGGCTGGCGATAGCAGAGCGTACGCTGGCGG CGCAGTTTAATCAGCCGGATCATGAAATTGTCGATCACTTCACCTATGTGTTTATGGGCGACGGCTGCCTGATGGAAGGT ATCTCTCACGAAGTCTGTTCGCTGGCGGGCACGCTGGGGCTGGGCAAGCTGATTGGTTTTTACGATCACAACGGTATTTC CATCGACGGTGAAACCGAAGGCTGGTTTACCGACGATACGGCAAAACGTTTTGAAGCCTATCACTGGCATGTGATCCATG AAATCGACGGCCACGATCCGCAGGCGGTGAAGGAAGCGATCCTTGAAGCGCAAAGCGTGAAAGATAAGCCGTCGCTGATT ATCTGCCGTACGGTGATTGGCTTTGGTTCGCCGAATAAAGCAGGTAAGGAAGAGGCGCACGGCGCACCACTGGGGGAAGA AGAAGTGGCGCTGGCACGGCAAAAACTGGGCTGGCACCATCCGCCATTTGAGATCCCTAAAGAGATTTATCACGCCTGGA ATGCCCGCGAAAAAGGCGAAAAAGCGCAGCAGCGCTGGAATGAGAAGTTTGCCGCCTATAAAAAGGCTCATCCGCAACTG GCAGAAGAGTTTACCCGTCGGATGAGCGGCGGTTTGCCGAAGGACTGGGAGAAAACGACTCAGAAATATATCAATGAGTT GCAGGCGAATCCGGCGAAAATCGCTACCCGTAAGGCTTCGCAAAATACGCTTAACGCTTACGGGCCGATGCTGCCTGAGT TGCTCGGCGGTTCGGCGGATCTGGCTCCCAGCAACCTGACCATCTGGAAAGGTTCTGTGTCGCTGAAGGAAGATCCGGCG GGCAACTACATTCACTACGGGGTGCGTGAATTTGGTATGACCGCTATCGCCAACGGCATCGCGCACCACGGCGGCTTTGT GCCGTATACCGCGACGTTCCTGATGTTTGTTGAATACGCCCGTAACGCCGCGCGGATGGCGGCACTGATGAAAGCGCGGC AGATTATGGTTTATACCCACGACTCAATTGGTCTGGGCGAAGATGGTCCGACGCACCAGGCTGTTGAGCAACTGGCTAGT CTGCGCTTAACGCCAAATTTCAGCACCTGGCGACCGTGCGATCAGGTGGAAGCGGCGGTTGGCTGGAAGCTGGCGGTTGA GCGCCACAACGGACCGACAGCACTGATCCTCTCAAGGCAGAATCTGGCACAGGTAGAACGAACACCGGATCAGGTTAAAG AGATTGCTCGTGGCGGTTATGTGCTGAAAGACAGCGGCGGTAAGCCAGATATTATTCTGATTGCCACCGGTTCAGAGATG GAAATCACCCTGCAAGCGGCAGAGAAATTAGCGGGAGAAGGTCGCAATGTTCGCGTGGTTTCCCTGCCCTCGACCGATAT TTTCGATGCCCAGGATGAGGAATATCGCGAGTCGGTACTGCCTTCAAATGTTTCTGCCCGCGTGGCAGTAGAAGCGGGTA TTGCCGATTACTGGTACAAATATGTTGGTCTGAAAGGGGCAATTGTCGGGATGACAGGTTATGGGGAATCAGCTCCGGCG GATAAGCTGTTCCCGTTCTTTGGCTTTACCGCCGAGAATATTGTGGCAAAAGCGCATAAGGTACTGGGAGTGAAAGGTGC CTGA
Upstream 100 bases:
>100_bases GTAGAAAAACTGTCTGAAGGCATTCGTCTGTTCGCCGTTGATCAACGCAAACTGGAAGATCTTCTTGCCGCCAAACTATA AACCAGCCACGGAGTGTTAT
Downstream 100 bases:
>100_bases TGGTGATCGCAGGATGCTGATTGTCGGATGTGACGCTGGCGCGTCTTATCCGGTCTACATGTCCCCGCCATTTTTTTTAA CGGGTGATCCACAACGTGGG
Product: transketolase
Products: NA
Alternate protein names: TK 2 [H]
Number of amino acids: Translated: 667; Mature: 666
Protein sequence:
>667_residues MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYD LPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLI ICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWNAREKGEKAQQRWNEKFAAYKKAHPQL AEEFTRRMSGGLPKDWEKTTQKYINELQANPAKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPA GNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLAS LRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQVKEIARGGYVLKDSGGKPDIILIATGSEM EITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVSARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPA DKLFPFFGFTAENIVAKAHKVLGVKGA
Sequences:
>Translated_667_residues MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYD LPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLI ICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWNAREKGEKAQQRWNEKFAAYKKAHPQL AEEFTRRMSGGLPKDWEKTTQKYINELQANPAKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPA GNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLAS LRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQVKEIARGGYVLKDSGGKPDIILIATGSEM EITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVSARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPA DKLFPFFGFTAENIVAKAHKVLGVKGA >Mature_666_residues SRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYDL PLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEGI SHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLII CRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWNAREKGEKAQQRWNEKFAAYKKAHPQLA EEFTRRMSGGLPKDWEKTTQKYINELQANPAKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPAG NYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLASL RLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQVKEIARGGYVLKDSGGKPDIILIATGSEME ITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVSARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPAD KLFPFFGFTAENIVAKAHKVLGVKGA
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=579, Percent_Identity=29.1882556131261, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI4507521, Length=579, Percent_Identity=29.1882556131261, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI133778974, Length=678, Percent_Identity=26.6961651917404, Blast_Score=171, Evalue=2e-42, Organism=Escherichia coli, GI1788808, Length=667, Percent_Identity=99.5502248875562, Blast_Score=1377, Evalue=0.0, Organism=Escherichia coli, GI48994911, Length=661, Percent_Identity=75.3403933434191, Blast_Score=1076, Evalue=0.0, Organism=Caenorhabditis elegans, GI17539652, Length=674, Percent_Identity=25.5192878338279, Blast_Score=159, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6325331, Length=666, Percent_Identity=48.3483483483483, Blast_Score=597, Evalue=1e-171, Organism=Saccharomyces cerevisiae, GI6319593, Length=668, Percent_Identity=45.059880239521, Blast_Score=548, Evalue=1e-157, Organism=Drosophila melanogaster, GI45551847, Length=597, Percent_Identity=27.8056951423786, Blast_Score=165, Evalue=1e-40, Organism=Drosophila melanogaster, GI45550715, Length=597, Percent_Identity=27.8056951423786, Blast_Score=165, Evalue=1e-40, Organism=Drosophila melanogaster, GI24645119, Length=557, Percent_Identity=27.4685816876122, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI24666278, Length=302, Percent_Identity=32.4503311258278, Blast_Score=129, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 73128; Mature: 72996
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE LSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLA EECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH NAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEGISHEVCSLAGTLGLGKLIGF HHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHE YDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLI ECCCCEEECCCCCCCCCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEE ICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWNAREKGE EEEHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH KAQQRWNEKFAAYKKAHPQLAEEFTRRMSGGLPKDWEKTTQKYINELQANPAKIATRKAS HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCC QNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPAGNYIHYGVREFGMTAIANGI CCHHHHHCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHH AHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLAS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHH LRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQVKEIARGGY EECCCCCCCCCCHHHHHHHHCEEEEEEECCCCEEEEEECHHHHHHHCCHHHHHHHHHCCE VLKDSGGKPDIILIATGSEMEITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVL EEECCCCCCCEEEEEECCCEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHC PSNVSARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHK CCCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCHHHCCCHHHHHHHHHH VLGVKGA HHCCCCC >Mature Secondary Structure SRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE LSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLA EECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH NAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEGISHEVCSLAGTLGLGKLIGF HHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHE YDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLI ECCCCEEECCCCCCCCCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEE ICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWNAREKGE EEEHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH KAQQRWNEKFAAYKKAHPQLAEEFTRRMSGGLPKDWEKTTQKYINELQANPAKIATRKAS HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCC QNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPAGNYIHYGVREFGMTAIANGI CCHHHHHCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHH AHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLAS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHH LRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQVKEIARGGY EECCCCCCCCCCHHHHHHHHCEEEEEEECCCCEEEEEECHHHHHHHCCHHHHHHHHHCCE VLKDSGGKPDIILIATGSEMEITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVL EEECCCCCCCEEEEEECCCEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHC PSNVSARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHK CCCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCHHHCCCHHHHHHHHHH VLGVKGA HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396116; 9205837; 9278503 [H]