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The map label for this gene is csiE [H]

Identifier: 162138390

GI number: 162138390

Start: 2812315

End: 2813595

Strand: Direct

Name: csiE [H]

Synonym: UTI89_C2857

Alternate gene names: 162138390

Gene position: 2812315-2813595 (Clockwise)

Preceding gene: 91211861

Following gene: 91211865

Centisome position: 55.52

GC content: 51.91

Gene sequence:

>1281_bases
ATGATGCCTACGCTTGCTCCACCATCTGTCCTTTCGGCTCCCCAGCGCCGCTGCCAGATCTTGCTGACGCTCTTTCAGCC
GGGGTTGACCGCCACCACGGCAACTTTCAGCGAGCTTAATGGTGTGGATGATGATATTGCCAGTCTTGATATCAGCGAAA
CAGGACGGGAGATCCTGCGCTATCATCAACTCACACTGACTACTGGTTATGACGGTAGCTACCGGGTTGAAGGTACAGTG
CTTAACCAACGTTTGTGTTTATTTCACTGGCTACGACGTGGTTTCCGTCTGTGTCCGTTATTTATTACCAGCCATTTCAC
CCCCGCCCTGAAGAGTGAACTGAAGCGGCGCGGAATTGCGCGTAACTTTTACGACGATACCAATCTACAAGCGTTAGTGA
ATCTCTGCTCCCGACGGCTGCAAAAACGCTTTGAAACGCGCGATATTCATTTCCTGTGTCTGTATCTGCAATATTGTTTG
CTGCAACACCACGCTGGAATTACGCCTCAGTTTAATCCGCTCCAACGTCGCTGGGCGGAATCCTGCCTTGAATTTCAGGT
AGCGCAGGAAATTGGACGCCACTGGCAGCGTCGGGCGCTCCAGCCTGTACCGCCTGATGAGCCACTGTTTATGGCATTAC
TTTTTTCCATGTTGCGGGTTCCCGATCCACTGCGGGATGCGCATCAGCGGGACAGGCAACTGCGTAAGTCTATCAAACGT
CTGGTAAACCACTTTCGTGAGCTGGGAAATGTTCGTTTTTATGATGAACAGGGGTTATGCGATCAGCTTTATACCCACCT
CGCCCAGGCGTTAAATCGCAGTTTGTTTGCCATCGGTATTGATAACACCCTGCCGGAAGAGTTCGCCCGCCTGTATCCAC
GCCTGGTGCGCACCACCCGCGCGGCGCTGGCTGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGCGGT
CTGGTCGCGGTGATTTTTGGTGCCTGGCTAATGCAGGAAAACGACCTGCATGAGAAACAGATTATTCTACTGACCGGGAA
TGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGCTACGCGAACTAACGTTACTGCCGCTCAACATTAAACATATGTCGG
TAAAGGTATTTTTGCAGACAGGCGCTCCGCGCGGCGCGGCACTGATTATTGCTCCTTATACCATGCCGTTACCGCTCTTT
TCACCACCGCTGATCTATACGGACCTGACGCTGACAACACATCAACAGGAGCAGATCCGCAAAATGCTCGAATCAGCATG
A

Upstream 100 bases:

>100_bases
GTGATGCTTGCCAACATTTCTGATGATTAGCATTCCCTTCGCCATTTCCCTGAGCAAACTTTAGCTATTCTTATCAATTA
TGCTTATGGGAGATCTACAG

Downstream 100 bases:

>100_bases
GGGAACAACTTTCGGGCGCAAAAACATTGCCGGAAGCGCCACCAGCGCCATCACCCAGAACACGCCGTGGCCGAGATATT
GATACAGGAAACCGGCGAAA

Product: stationary phase inducible protein CsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATTATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTV
LNQRLCLFHWLRRGFRLCPLFITSHFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRKSIKR
LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESG
LVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKVFLQTGAPRGAALIIAPYTMPLPLF
SPPLIYTDLTLTTHQQEQIRKMLESA

Sequences:

>Translated_426_residues
MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATTATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTV
LNQRLCLFHWLRRGFRLCPLFITSHFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRKSIKR
LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESG
LVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKVFLQTGAPRGAALIIAPYTMPLPLF
SPPLIYTDLTLTTHQQEQIRKMLESA
>Mature_426_residues
MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATTATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTV
LNQRLCLFHWLRRGFRLCPLFITSHFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRKSIKR
LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESG
LVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKVFLQTGAPRGAALIIAPYTMPLPLF
SPPLIYTDLTLTTHQQEQIRKMLESA

Specific function: Unknown

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI87082124, Length=426, Percent_Identity=98.5915492957747, Blast_Score=863, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011608 [H]

Pfam domain/function: PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 49088; Mature: 49088

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCC
>Mature Secondary Structure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HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]