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The map label for this gene is ligD

Identifier: 162136026

GI number:

Start: 4108118

End: 4110853

Strand: Reverse

Name: ligD

Synonym: RPC_3685

Alternate gene names: NA

Gene position: NA

Preceding gene: 90425171

Following gene: 90425167

Centisome position: NA

GC content: NA

Gene sequence:

>2736_bases
GTGACGCTCGACAACCTCAAGCTCTATCGCAAGAAGCGCGACTTCGAGAAGACCGCGGAGCCGAGCGGCGAAGCGAAAGT
TGCGCCGTCGCAGCGTCGCCGCTTCGTGATCCAGAAACACGATGCCACAAGGCTGCACTACGATCTGCGGCTGGAATTCG
ACGGCGTGTTCAAGTCGTGGGCGGTGACGCGCGGGCCGTCGCTCGATCCGCACGACAAGCGGCTCGCGGTCGAGGTCGAG
GACCATCCGCTCGACTACGGCGATTTCGAAGGCACCATTCCGGAGGGCCAGTATGGCGGCGGTACGGTGCAATTGTGGGA
TCGCGGTTACTGGGAGGCCGACGATCCAGAGCGCGGCTTCAAGACCGGCGACCTCAAATTCACGCTGCACGGCGAGAAGC
TGCACGGCTCCTGGGTCTTGGTGCGGATGCGCAACGATCGCAGCGGCGGCAAGCGTACCAACTGGCTGCTGATCAAGCAC
CGCGACGACGACGCCCGCGAAGGCGACGCCAACGACATCCTCGCACAGGAAGCCTCGGTGGCGTCGGGCCGCGCGATGGA
GGAGATCGCTGCCGGCAAGGGCCGCGCGCCGAAGCCGTTCATGGTGAAAGCCGCGCGGGCCAAGGCCGACGCGGTGTGGG
ATTCCAATCGCGGGCTTGCGGCCGAGGCACGCGGCGAGCGTGAAGCGCCAGCCAAGCGCCGCGCGGCGTCAAGACCGGCG
AAACAGGCCAAGGCGAAACAGGCCAAGGCAAAACCCGCCAAGCGCGCCAAGGCAAAGGCCGTCGCCGCGATGCCGGACTT
CATCGCGCCGCAGCTCTGCAGCTCGGTGGAGCGACCGCCCGGCGGCGCGGGCTGGGGCCACGAGATCAAGTTCGACGGCT
ACCGCGTGCAATTGCGCGTCGAAGGCGGCCAGGCCACGCTGAAGACCCGCAAGGGGCTGGACTGGACGCGGAAATTCCGG
GCCATCGCCGACCAGGCCGCGGCGCTGCCGGATGCCATCATCGACACCGAGATCGTCGCGCTCGACGCCGCCGGCGCGCC
GGATTTCGCCGCCTTGCAGGCCGCATTGTCGGACGAGAACACCGACAATCTGATCTGCTTTGCGTTCGATCTGTTGTTCG
CCGAGGGCGAGGATCTGCGCGCCTTGCCGCTCAGCGAGCGCAAGCAGCGGCTTCAGGAGATGCTCGAGCAGGCGCGCGGC
CGCCGTAAGCAGAGCGTGATCCGCTATGTCGAGCACTTCGAAAGCGGCGGCGACGCGATCCTGCAATCGGCCTGCAAGAT
GTCGCTGGAAGGCATCGTCTCCAAGAAGCTCGACGCGCCGTATCGCTCCGGCCGCAGCGAGAGCTGGACCAAGGCGAAGT
GCCGCGCCGGCCACGAGGTGGTGATCGGCGGCTGGAAGAGCAACGCCGGCAAATTCCGCTCGCTCATGGTCGGTGTCCAT
CGCGACGATCATCTGGCCTATGTCGGCATCGTCGGCACCGGCTTTGGTCAGGTCATGGTGAAGCGCATCATGCCGGCGCT
GAAGGCGAACGCCTCGAACGAGAATCCGTTCGGCGGCAAGACCGCGCCGAAGAAGACCGCAGAGGTGCATTGGCTGAAGC
CGGAGCTGGTGGCGGAGATCGAATTCGCCGGCTTCACCGGCGCCGGCATGGTGCGCCAGGCGGCGTTCAAGGGCCTGCGC
CAGGACAAGCCGGCCGAGGAGGTCGAGGCGGAAACGCCGAAGAAAACCGCGGTGGCCGAACCGGGCCGCGGCAAGCGCGG
CGGCAAAGCCAAGGCGGGCGCGGCAAAGCCAGCCGCGTCGAAGCCCGCCGCGGCGAAGCCCGGCCATCCCGCGCAGGTGA
TGGGCGTGCTGATCTCCAAGCCCGACAAGCAATTGTGGCCCGACGCCAGCGATGGTGAGCCGGTGACCAAGCTCGATCTG
GCGCGCTACTTCGAGGCGGTCGGCGATTGGATGCTGCCGCACATCAAGGGCCGGCCGTGCTCGATCGTGCGGGCGCCGGA
CGGCATCAAAGGCGAACAGTTCTTCCAGCGCCACGCCATGCCCGGCACCTCGAACCTGCTGGAGCTGGTCTCGGTCTCGG
GCGACCGCAAGCCGTATCTGCAGGTCGACCGCGTCGAGGGCCTCGCCGCGGTGGCGCAGATCGGCGGGCTGGAGCTACAC
GCCTGGAATTGCGCGCCGGATGCCCCCGACGTCCCCGGCCGTTTCGTGTTCGACCTCGATCCGGCGCCTGACGTGGCGTT
TTCCGACGTGGTGGCCGCGGCGCGCGAGATGCGCGAACGCTTGACCGCGTTGGGCCTGGAGAGTTTCTGCAAGACCACCG
GCGGCAAGGGGCTGCATGTGGTGACGCCGCTCTCAAAGTCGAAAGACAATGTCGACTGGAAACAGGCCAAGGCGTTCGCC
CAGGCGGTGTGCCGGCAGATGGCCGAGGATAGCCCCGAGCGCTATTTGCTCAACATGTCGAAGAAGCTGCGCGAGGGAAA
GATCTTCCTGGACTATCTGCGCAACGACCGCATGGCGACCGCGGTGGCGGTGTTGTCGCCGCGGGCGCGCGACGGCGCCA
CGGTGTCGATGCCGTTGACTTGGCCGCAGGTGAAGGGCGATCTCGATCCGAAGCGATTCACGTTGCGCACGGTGCCCGGG
TTGTTGGCGAAATCCAAAGCCTGGGCGGGTTACGACGAAGCGGCCACCCCGCTGAAGGCTGCCATCAAGCGGCTGGCCTC
CAGCGGAACGACGTAG

Upstream 100 bases:

>100_bases
ATCTCGACGCGGGCGCGTCGCTGCAAAGCCGGAACTTCAACCGCAATTGCGGGTTTTGGTTCCGAGTTGTTGAATGGCTC
GCTCGCACAGAGGATTTCCC

Downstream 100 bases:

>100_bases
CGCTGAGCGCTGGGCGCTTAGAGTTTGCCGAGCAGCAACAGGATCAGCAGAATCACGATGATCAGGCCGAGACCGCCGCC
GCCGTAATAGCCGGTGCCGT

Product: ATP-dependent DNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>911_residues
MTLDNLKLYRKKRDFEKTAEPSGEAKVAPSQRRRFVIQKHDATRLHYDLRLEFDGVFKSWAVTRGPSLDPHDKRLAVEVE
DHPLDYGDFEGTIPEGQYGGGTVQLWDRGYWEADDPERGFKTGDLKFTLHGEKLHGSWVLVRMRNDRSGGKRTNWLLIKH
RDDDAREGDANDILAQEASVASGRAMEEIAAGKGRAPKPFMVKAARAKADAVWDSNRGLAAEARGEREAPAKRRAASRPA
KQAKAKQAKAKPAKRAKAKAVAAMPDFIAPQLCSSVERPPGGAGWGHEIKFDGYRVQLRVEGGQATLKTRKGLDWTRKFR
AIADQAAALPDAIIDTEIVALDAAGAPDFAALQAALSDENTDNLICFAFDLLFAEGEDLRALPLSERKQRLQEMLEQARG
RRKQSVIRYVEHFESGGDAILQSACKMSLEGIVSKKLDAPYRSGRSESWTKAKCRAGHEVVIGGWKSNAGKFRSLMVGVH
RDDHLAYVGIVGTGFGQVMVKRIMPALKANASNENPFGGKTAPKKTAEVHWLKPELVAEIEFAGFTGAGMVRQAAFKGLR
QDKPAEEVEAETPKKTAVAEPGRGKRGGKAKAGAAKPAASKPAAAKPGHPAQVMGVLISKPDKQLWPDASDGEPVTKLDL
ARYFEAVGDWMLPHIKGRPCSIVRAPDGIKGEQFFQRHAMPGTSNLLELVSVSGDRKPYLQVDRVEGLAAVAQIGGLELH
AWNCAPDAPDVPGRFVFDLDPAPDVAFSDVVAAAREMRERLTALGLESFCKTTGGKGLHVVTPLSKSKDNVDWKQAKAFA
QAVCRQMAEDSPERYLLNMSKKLREGKIFLDYLRNDRMATAVAVLSPRARDGATVSMPLTWPQVKGDLDPKRFTLRTVPG
LLAKSKAWAGYDEAATPLKAAIKRLASSGTT

Sequences:
NA

Specific function: NA

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA