Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90023471

GI number:

Start: 4828990

End: 4831038

Strand: Reverse

Name: Not Available

Synonym: Sde_3831

Alternate gene names: NA

Gene position: NA

Preceding gene: 90023472

Following gene: 90023469

Centisome position: NA

GC content: NA

Gene sequence:

>2049_bases
ATGAGTTTTTTACGTAATTTAGATATAAAGCCAAAAATACTAGCCAGTACTCTAGGCATTGTATTTGTTACCACGCTGGT
AATTGATGTTGCTATTTTTGCAATGCAGTACCATACAGCCAAAACAAACTTAGATGCACGCTTAAATATTGAAGCGAATA
TTATTAGCCAGAATATTTCTGCTTCTGTACTGTTTGATGATGAAAAAACCACGTCAGAAATTCTCTCTTCGTTTAAATCT
GACCCCGCAATATTAAAAGTAGAAGTACTAGATTTAGCCGAAAAAGTATTTTCAGAGCACGTTACTAAAGATGGGTATAT
TGTAGGGGGCGCTGATTTCTCGATAAGTAAACCTATTGTGTTTAGTGGCGACGAAATTGGTACACTGGTGGTTTATGTTT
CTGATGCAGAGATAAGCTCTGGTATATCCAAAACCATTTTATTCAGTATAACTACGCTAGTTATTGCATTGGGGGTGGCG
TTTTTATTGTCGTTGGCTGTACAGGGGATGATATTTGAATCCATTCTCGCGTTGCATAACACCTCGCAGCGAGTTGCCAA
AACCCGCGATTACAGTTTGCGCGCAGAAATATTCAGTGAAGATGAAATAGGCAGGTTGGCAAAAACATTCAACAGCATGC
TTGAGCAGGTAGAGCAACGCGATGCGATGCTTGAAAAGCAAGTAAGTCATCGCACTCTAGAGTTAGAAAAACTTGCAGAA
GAATTTCGTTTTCGCGCGTTTCACGATAACCTCACCGGCTTGCCAAACCGCGCCTTATTAAACGAGCGCTTTGGCTTATG
CATTGAGCACGCCCGCCGCTGTGGTAACAAGTTTGTGTGCTTGCTGCTAGATTTAGACGACTTTAAAACCATTAACGACA
CCAAGGGTCACGATTATGGCGATGAGTTATTGATTGGTGTGGCGCAAAGGTTAAAAGCTTCTGTGCGGGCAGAAGATTTA
GTGTGCAGGCTGGGTGGCGATGAGTTTATTATTTTGGCCACCGATATAGAAACCGAGTTTGATGCGCGCCAAATAGCAAA
TAATATTCTGTTTGCGTTAAGTGAAGACATTGTAATTAAAGACGATAAAATTAAAACCGCTGTTTCGATTGGCGGCGCCA
TTTACCCGCAGCATGGCGAAACAGTGGGTGTGCTTAAGCGCCACGCCGATGTGGCCATGTACCATGCTAAAGACGGTGGT
AAAAATAGGTTTAGTTTATTTTCGCACGGTATGCAGGAAGAAGTGCACTACCGCTTGATGATTCAACGCGATTTAGAGCC
CGCCATTTTAGATAATCAATTAATTATTTATTTTCAACCCAAAGTGCTGGCAGAAACCGGCGAGGTGGCAGGTTGCGAAG
CGCTGGTGCGCTGGCAGCACCCGGAAGAGGGTTTTTTAACGCCAGATAAATTTATACCCTATGCAGAAGAAACACCTCTT
ATTCGCGAGATTGACTACTACGTAATAAGAGAGTGCTGCAAAAAATTAAAAGAATGGGCTGCTAGGTTTGATAAACCCGT
ACCTATTGCCGTGAACTTATCGGGTAGGCATTTTCGCTCTTTTAAAATTGTTGAAGTGCTAAAAGAAGCCGTTGCCAGCG
CAGGTATTAGCCCCGATTTACTGGAAATAGAAATTACCGAAGCGGTGCTTATTGCCGACCCAGACAAAGCGCAAAAAGTG
GTTCACGCAATTAAATCTATTGGCTTTACCATTAGCTTGGATGATTTTGGCACAGGCTACTCATCGCTTAATTATTTGCG
TACCCTACCAATTGATATTATCAAACTAGATAGATCGTTTATTGCCAATATAGATACCAGTGAGCAAGATAGAAGGCTAA
CGCGAGGGATTACATCATTAGCAAAAGGCTTAGATTTAACTATGGTGGCGGAAGGCGTAGAAACCGAAAGTCAACTGCAA
ACATTATTAGATTTGGGCTGCCATTGTTTTCAAGGTTACTACTTCTCTAAGCCCGTTCCCGAAACCGAATTTTTAGCGTG
GCATAAAAAATATAACAATGCCTTGGGGAATAATCATAAAGTAGGGTGA

Upstream 100 bases:

>100_bases
AAGAGAGTAAGCTTAAATTTGAAATAAATAAACCCCTATTAGACGATAAGAAATTCAATGTTAGCTCTAAGCTAATGCGC
CTTTCGCAGAAGGAGGGCAA

Downstream 100 bases:

>100_bases
TTATTATTAGTGGACAGCTCGCGGGTGGGCACTGCCCACCATTGAAGAATTAGCAGTATAGAATGTTGTTCAATAATTGC
TAGCAACTAGCAACTAGCAA

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>682_residues
MSFLRNLDIKPKILASTLGIVFVTTLVIDVAIFAMQYHTAKTNLDARLNIEANIISQNISASVLFDDEKTTSEILSSFKS
DPAILKVEVLDLAEKVFSEHVTKDGYIVGGADFSISKPIVFSGDEIGTLVVYVSDAEISSGISKTILFSITTLVIALGVA
FLLSLAVQGMIFESILALHNTSQRVAKTRDYSLRAEIFSEDEIGRLAKTFNSMLEQVEQRDAMLEKQVSHRTLELEKLAE
EFRFRAFHDNLTGLPNRALLNERFGLCIEHARRCGNKFVCLLLDLDDFKTINDTKGHDYGDELLIGVAQRLKASVRAEDL
VCRLGGDEFIILATDIETEFDARQIANNILFALSEDIVIKDDKIKTAVSIGGAIYPQHGETVGVLKRHADVAMYHAKDGG
KNRFSLFSHGMQEEVHYRLMIQRDLEPAILDNQLIIYFQPKVLAETGEVAGCEALVRWQHPEEGFLTPDKFIPYAEETPL
IREIDYYVIRECCKKLKEWAARFDKPVPIAVNLSGRHFRSFKIVEVLKEAVASAGISPDLLEIEITEAVLIADPDKAQKV
VHAIKSIGFTISLDDFGTGYSSLNYLRTLPIDIIKLDRSFIANIDTSEQDRRLTRGITSLAKGLDLTMVAEGVETESQLQ
TLLDLGCHCFQGYYFSKPVPETEFLAWHKKYNNALGNNHKVG

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA