Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 90022925

GI number:

Start: 4195553

End: 4197835

Strand: Reverse

Name: Not Available

Synonym: Sde_3285

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022928

Following gene: 90022924

Centisome position: NA

GC content: NA

Gene sequence:

>2283_bases
ATGAAAAAAGAGAATGTAAACATCGCGAAGCAGGGCTTGCTAGTTGTTTTGGTAAGCTTCTTTATGAGCTTTTCCCTAAT
GGGTTGCGCCAAAGAAATTCTGGTGAACTCGCAGGAACAATACGCAGAAGCATTGAGTTCAGTTAAGCCTGGCGACACCA
TTGTGTTGGCTAATGGCGAATGGAAAGATTTCGAAATTGTATTTACAGGTAAGGGCACTGAAAAAGCGCCAATCACCCTA
ACTGCGCAAACAAAAGGCAAGGTGTTAATTACTGGCGAGTCAAACTTGGCGCTTGCCGGTGAGCATTTGGTGGTATCTGG
TTTGGTGTTCACTAATGGCTACACACCAAGCGATGCCGTTATCTCATTTAGAGCTGCTAAACCCGTAGCGGAAGACGACT
ACAGTACAGTTGCAATGCATTCTCGAGTCACCGAGGTGGTGATTGATAATTTTAGCAACCCAGAGCGTTTTGAAACTGAC
TCGTGGGTGCTTATCTATGGCAAACACAACCGTGTTGATCACAGTAACTTCACCGGCAAGCGCAATAAAGGTGTGTTGAT
GGCTGTGCGTTTAGATACCACGCATAGCCGCGAAAACCATCATGAAATTGATCACAACTACTTTGGTCCGCGCGATATTC
TTGGCTCCAACGGCGGAGAGACTTTGCGTATTGGCACGAGCCACTTCTCTCTTTCAGACTCTTTCACTTTAGTAGAAAAC
AACTATTTCGATCGCTGTAACGGTGAGTTAGAGATTATTTCTAACAAGTCTGGGTCTAACAAGTTTATTGGAAATACCTT
CTTTGAATCGCGTGGCACGCTAACTATGCGTCACGGTCATGGAAACGTAATCGAAAACAATGTGTTCTTTGGTAATGGCA
AAGATCACACCGGTGGTATTCGTGTAATTAACGAGCGCCAAACGGTACGCAACAACTACATGTCTGATCTTGCAGGCTAC
CGCTTTGGTGGTGGTTTAGTTGTTATGAATGGCGTGCCTAACTCAGCGATAAATCGTTACCACCAAGTAAAGAATGCCGT
TATAGAAAACAACACGCTGGTGAATGTCGATCACATTCAGCTGGCAGCTGGTAGCGATAAAGAGCGAACAGCTACACCCG
TGGATTCCAAGTTTTCAAATAACTTGATCGTCAACGATGATAAACGCAACCCGTTTACCGTATACGACGATGTTAGCGGC
ATAACCTTTTCTAATAACAGTATTAGTGCAGCGTCCAAAGAGCTAAAGAAAGGCTTTGAAGTTGATGCCGCTAAGATTGC
TAAAAACGATCAAGGCATGGTGTTTGATGCCTCCGGTACTTACGGTGCAAGCAAGTCGCTAAAACCCGTTCGCAAGCAAG
ATGTGGGCGCTAGCTGGTTTGTTAAGTCGGAAGATCGCAAAGCATTCCAATCGGGTAAAACAGTTAAAGCTGGTGCTGGC
CAAAACTCTATCTACGATGCAGTAGAGCAGGTAGAAGATGGTGGCGTTGTCGAACTGGCAGCGGGTGATTATGTAGAAGC
TAAAACAATCACTATTAACAAAACCGTAACCGTTAAAGCAGCAGCCGGCGAAAAAGTAAATATTGAGTTCTACAAAAAGT
CGCTGTTTGAAGTGGTTGATGGCGGCAGCTTACAGCTTGAAGGTTTGGCAATTAGCGGTGCGAGTTCGCCAGACGATGTA
GGTAATGCGGTCGTGCGTACATCGCGTTATTCCATGTTAAAAAATTATCGCTTAGAGCTTAAAAATTGCGAGTTCACAGA
CCTAGATGTAAACAGATTCTTCAACGTTGTATCGGTTAGCAAGTCTACGTTAGCAGATAACATTTTGTTAGAAAACGTAA
GCGTTAAAAAGGTTACTGGCTCAGTGTTGAAGTTAGATCTTGAGTCCGATGATTACGGTATTTATAACGCAGAATACGTC
ACGATTAAGAATAGCCAGTTTGAAGATGTAGATGGCCCATTGATTACTTACTACCGTGGTGGTACCGATGAAAGTACTTT
CGGCCCACACTTTGAAATGACTGGCAGCACCTTAAAAAATGTAGGTAATGGCAGCAAGAACAAGTTGAACGCGTCACTGT
ATTTACATGGTGTACAGGTAACGGCTATTTCAAACAACAAATGGCTAGATAGTAAGCCTGTAATTATTGAGCACACTGTG
GGTGAGCCTGTAACAAGCGTTGTAGATAACACGTTTGTGAATACAGCTAAGTTAGATTTACAAGAGCTGTATTCTAAGAA
GACAACCACCGCAGTAATTAAAAATAATACCTATAAAAAATAA

Upstream 100 bases:

>100_bases
CCAGTTGCGCTCCGTGGCGGGACTGGCATTTTTTTCTCGACAAGTTGCTCTTTGCTAGACGTGTTCTGGCAATTTCATTC
ACCAATAATAAGTGCATTGT

Downstream 100 bases:

>100_bases
GGCAGTGCTAAGTAATATGTTAAGCGTTAATACTATTAAAAACACCTTGCTGGCAGCAGTGCTTGTTTCTGTGCCTGCAA
CTGCTCAAGTTTCTGGCAAT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>760_residues
MKKENVNIAKQGLLVVLVSFFMSFSLMGCAKEILVNSQEQYAEALSSVKPGDTIVLANGEWKDFEIVFTGKGTEKAPITL
TAQTKGKVLITGESNLALAGEHLVVSGLVFTNGYTPSDAVISFRAAKPVAEDDYSTVAMHSRVTEVVIDNFSNPERFETD
SWVLIYGKHNRVDHSNFTGKRNKGVLMAVRLDTTHSRENHHEIDHNYFGPRDILGSNGGETLRIGTSHFSLSDSFTLVEN
NYFDRCNGELEIISNKSGSNKFIGNTFFESRGTLTMRHGHGNVIENNVFFGNGKDHTGGIRVINERQTVRNNYMSDLAGY
RFGGGLVVMNGVPNSAINRYHQVKNAVIENNTLVNVDHIQLAAGSDKERTATPVDSKFSNNLIVNDDKRNPFTVYDDVSG
ITFSNNSISAASKELKKGFEVDAAKIAKNDQGMVFDASGTYGASKSLKPVRKQDVGASWFVKSEDRKAFQSGKTVKAGAG
QNSIYDAVEQVEDGGVVELAAGDYVEAKTITINKTVTVKAAAGEKVNIEFYKKSLFEVVDGGSLQLEGLAISGASSPDDV
GNAVVRTSRYSMLKNYRLELKNCEFTDLDVNRFFNVVSVSKSTLADNILLENVSVKKVTGSVLKLDLESDDYGIYNAEYV
TIKNSQFEDVDGPLITYYRGGTDESTFGPHFEMTGSTLKNVGNGSKNKLNASLYLHGVQVTAISNNKWLDSKPVIIEHTV
GEPVTSVVDNTFVNTAKLDLQELYSKKTTTAVIKNNTYKK

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA