Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90022222

GI number:

Start: 3271610

End: 3273778

Strand: Reverse

Name: Not Available

Synonym: Sde_2577

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022224

Following gene: 90022220

Centisome position: NA

GC content: NA

Gene sequence:

>2169_bases
ATGGCGACTGTGTTTTCAAGCACAACAGGGGTGATTGGTCAGCTCCCCACTAACAAGCAAGCGAATGATAGCTCGGCAAA
GGATAGTTATTTCGATCTGGCAGGGATTCTAGATGCCATGTCCGGGATGGTGTTCTTATTAGATCGCTGGGGTGTGATTC
AGCTGGCAAATAGTCTCGCATTAAAATTGTGTAACGGTGAAAATCCCGTTGGCAAAAATGTGATGGAGCTTGATTGTGGC
TGGCAAGATGCCAGTGCGTGCCAGCGCGATATTCTATACGTAGTTCGAAGCGGCTTAGCAAAGCGTGGCTCAGTTGAAAA
TATTTTTGTTGAAGGGCAAATGCGCTGTTACTGCGTTGATATTGCCCCCGCGAGTAAACATGCTCACTCCCCAGTAGGTG
TTTTTCTTACGCTTACAGACATTACCCATCAAGAAGACAGTTTACGCGCGCTGCGCGATAGTGAATCGCGCCATAGGGCT
TTCATCGCCAGTAGTGCAGATGCTATTTGGGCCTATGAGCTTGTGCCACCTGTCGATATCTCGCTACCCGTTAATCAGCA
GGTAGATTTAATTATGCGCCGGGCACTACTAACAGAGTGCAATGAAAAAATGGCGCGTATATACGGTGTATCCGATATAA
CCAGTGTGGTTGGTCGGCCCATTTACCTTAATGGTTCCATGTCCAACAAAGAGGATATACGGCGTTTTGTACTCAACAAC
TACCGTGTTGAAGACCACGAGTTTACGCGTATAGATAAGTTTGGCGAACTGGGGTACATGTTATCAAGTGCGACGGGCGT
GATAGAGAACGGTAAGCTGATGCGCGCATGGGGCTCTACACGCGATGTGACAGACCAACGGCGCTATTTGGATCGAATGC
GATATCTCGCAAACCATGATACGCTCACCTCCCTGCCGAATCGTAACTTGTTATACAAAGAATTAGAGCGCGTACTATCC
AATCGCAGCCAAAATCAAAAAGTTGCCCTGTTGCTAGTCGATTTAGATAGATTTAAAGAGATTAACGACACCCTTGGCCA
TCAAGCTGGCGATAAAGTGCTAAAGCAGTTAGGCCCGCGTTTAGAGGTTGAGCTTGGCGACACCCCGGGTATGGTTGCGC
GATTGGGGGGCGATGAATTTGCTATTTTACTATCCAATATTCGCAATCGGCAGCATGCGGTAGTTACCGCGCACAGGTTT
GCCGATGCGATTGCCGAGCGCTTTGATTTGGATACCTTCAGCACCGAGCTGCAATCGAGTATCGGTGTGGTTATTTGCCC
AGACCAAGCCGAAGATGTAAGCACGTTGATGCGCTATGCCGATGTGGCTATGTATCACGCAAAAAACAATATGAAGGCCG
TATCTATTTACGATGCCGAATACGATCCGAATTCTGCTAAGCGGTTAACGGTTACAGGGGCTTTGGGCAGGGCAATCCGC
GAAGAGCAGTTGGTGCTTTTTTACCAACCAAAAGTGGACTTAAAAACACACAGAGTTTATGGGTTTGAAGCGCTAATTCG
TTGGATTCACCCAGAGCTGGGTTTTATCCCCCCAAGCGATTTTGTGCCTATGGTGGAGTTATCCAGTTGGATATACCCCA
TGACATTATGGGTGCTGGAACAAACAATTAAGCAGTGCGCCATGTGGCGAGATGCGGGGTTGGATTTAACTCTAGCGATG
AACTTATCGCCGCGCAATTTAGCGGATGATCGCATTGTTAACGACTTGGAAGTGCTGCTTAAAAAGTACAATGTGCGCGG
TGGAATGTTGGAAATGGAAATTACAGAAAGTATGTTAATGTCCGACCCCAATCGTGCTAGCCGCATATTAGAGCGTATAA
ATAAACTAGGTGTGCGCTTGTCGATAGATGATTTTGGTACAGGTTATTCTTCGCTAGCGTACTTAAAACGATTACCCGTC
AAAACCTTAAAAATTGATGGTTCGTTTATTATGAATATGCTCGAAAGTGAGCAAGATGAAATTATTGTTAAGTCCACTAT
TCATTTAGCGCACAACTTAGGTTTAGATGTTGTAGCGGAAGGAGTGGAAACCCTAGAGGTATACGATCGTTTAAATAGTT
TGGAGTGTGATAGCGTGCAAGGCTATTACATAGCGAAGCCAATGCCAATTGAAAGTGTTGGCGCTTGGCTTGCAGATTAT
CAGTCTTAG

Upstream 100 bases:

>100_bases
CAGGGCAGAAGATATGTCGCCTATGTTGGCTATTCGTTTTGCGCATCTGTTATCGCGGTCTGGTTCGGTCGCAACAATGT
ATTAACTATTGTGAGCGTTT

Downstream 100 bases:

>100_bases
TAATTATGTAGAAAGCGGCTCATTTACCAAGCGCCGAAGATTGTTTGATTTTTAAAGAAGAGTCTCCCTTTCTAACTGCC
TTACTTCTTTTAAGCGCTCT

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>722_residues
MATVFSSTTGVIGQLPTNKQANDSSAKDSYFDLAGILDAMSGMVFLLDRWGVIQLANSLALKLCNGENPVGKNVMELDCG
WQDASACQRDILYVVRSGLAKRGSVENIFVEGQMRCYCVDIAPASKHAHSPVGVFLTLTDITHQEDSLRALRDSESRHRA
FIASSADAIWAYELVPPVDISLPVNQQVDLIMRRALLTECNEKMARIYGVSDITSVVGRPIYLNGSMSNKEDIRRFVLNN
YRVEDHEFTRIDKFGELGYMLSSATGVIENGKLMRAWGSTRDVTDQRRYLDRMRYLANHDTLTSLPNRNLLYKELERVLS
NRSQNQKVALLLVDLDRFKEINDTLGHQAGDKVLKQLGPRLEVELGDTPGMVARLGGDEFAILLSNIRNRQHAVVTAHRF
ADAIAERFDLDTFSTELQSSIGVVICPDQAEDVSTLMRYADVAMYHAKNNMKAVSIYDAEYDPNSAKRLTVTGALGRAIR
EEQLVLFYQPKVDLKTHRVYGFEALIRWIHPELGFIPPSDFVPMVELSSWIYPMTLWVLEQTIKQCAMWRDAGLDLTLAM
NLSPRNLADDRIVNDLEVLLKKYNVRGGMLEMEITESMLMSDPNRASRILERINKLGVRLSIDDFGTGYSSLAYLKRLPV
KTLKIDGSFIMNMLESEQDEIIVKSTIHLAHNLGLDVVAEGVETLEVYDRLNSLECDSVQGYYIAKPMPIESVGAWLADY
QS

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA