Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020860

GI number:

Start: 1557346

End: 1559091

Strand: Direct

Name: Not Available

Synonym: Sde_1213

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020859

Following gene: 90020863

Centisome position: NA

GC content: NA

Gene sequence:

>1746_bases
TTGAATACTAAAGTTATCTCGCGTCGTTCACTTCCCGATTCGCAAGTATTAAATAGTTCGTTGGCAACAGTCGAAGATCT
TATCAAGCAGCTATATGCCGCACGAGGTTATAGCAGTGATAAGCCAACTCAGTACGCTCTAAGCGAAATGCTGCCGCCTA
CAAATATGCGCGGTATTGCAGAAGGCGCAAATATTATTGAAGCAGCGCTGCGCACAGGTGAACGCATAGTGATTCTTGGC
GATTTCGATGCGGATGGGGCAACCAGTACAGCATTGGCTGTGCGATGTTTGCGGGCGATGGGGGCACAGCATGTGGATTA
CTTGGTGCCTAATCGCTTTGAATTCGGCTACGGCTTAACGCCAGAAATTGTTGCGGTTGCTGCGAAGCTAAACCCCAATT
TAATTATTACGGTCGATAACGGTATTGCCAGCGTAGAAGGCGTTAATGCTGCTAATGCATTAGGTATTAAGGTGCTGGTT
ACCGATCATCACTTGCCGCCAGAGCAACTGCCAGACGCCGCCGCTATTGTTAACCCCAATCAAAAAGGCTGTGAATTTGG
CAGTAAAAATTTGGCGGGCGTGGGCGTGATTTTCTATTTACTGTGCGCCTTGCGTTCGCAGTTACGCGCCAGTGGTTGGT
TTGAGCAACGCGGTATAGAGCCGCCTAATATGGCGAGTTACTTAGATTTAGTGGCACTAGGTACAGTAGCCGACGTGGTG
CCCCTCGATTTTAATAACCGCATTTTGGTGTCGCAGGGCATTGCGCGTATGCGCCAAGGGGTATGTATTGCCGGTATTCG
CGCCTTGTTTCAAGTTGGGGGGCGCAATATAGAGCGAGTGCAGTCCACCGACTTAGGCTTTGTTGTTGGCCCAAGGCTAA
ACGCTGCAGGTCGATTAGACGATATGTCGCTGGGTATTAAAATGCTGCTTACCGATAACTACACAGAGGCGTTGCATTTG
GCGGGTGAGCTGGACTCTTTAAACCGCGAGCGCCGCCAAATAGAGGCTTCTATGCAGCATGAAGCGTTTAAGCTGCTTGA
TGAATTGGCGCTAGATGGCGAGCAAACACCTATGGGGGTAAGCCTTTATCAAGCTGACTGGCACCAAGGCGTTATTGGCA
TTTTAGCCTCGCGTATTAAAGATAAGCTGCATCGACCTACAATTGCCTTTGCCGATGCCACGGACACAGAAATAAAAGGG
TCTGGCCGCTCGGTAGAGGGGGTGCACTTGCGAGATATTTTGGATCAAGTGGCAACTGAAAACCCAGGCTTATTATCTAA
GTTTGGTGGTCATGCAATGGCGGCTGGGCTGTCTTTGCCCAAAGAGTCATTCACCGCATTTGCCGAGGCGTTCGACCGCT
GTGTGAGCGCTCATTTGGGGGGCGAGGCGTTAACGGCCAAGGTTATTACTGACGGCGAATTGCCGGCCCATTTGATGGAT
TTGGCCACCGCCGAAGCAATAGCCCATGCAGGGCCTTGGGGGCAGAATTTTCCCGAGCCATTATTCTATGGCGAGTTTTT
GCTGGTTCAGCAGCGTATTGTGGGTGAAAAGCACTTAAAAATGGTGGTAACCCCCAGTGAGTACTCTGGGTTAGCCATAG
ATGCCATTGCTTTTAATGTTGATGTAGCAAGTTGGCCAAATAATAGTGTGGAGCGTGTGCGTTTAGCTTATGTGCTTGAT
GTGAATGAGTTTCGCGGCAATAAATCGTTGCAACTGCGCGTTGCTCATTTAGAGGCTCTCATTTAG

Upstream 100 bases:

>100_bases
TCGATATAGAAATGCAATTGCTCTGCCGCCAGCTCGGTATAGATAAATAATCGTTACTCCCCTATAGTCGCCCTGTAATT
AATTAGCAGGATTTTCTTCT

Downstream 100 bases:

>100_bases
AGGCTCTCATTTAGAGGCTTTGTTGAGAGTTATTTTAGCTTGTCGACTTTGTGTTAAGCCGATTGCGCCCAAGCCACACC
CGCGCGGCGGCGTTCGATAT

Product: exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>581_residues
MNTKVISRRSLPDSQVLNSSLATVEDLIKQLYAARGYSSDKPTQYALSEMLPPTNMRGIAEGANIIEAALRTGERIVILG
DFDADGATSTALAVRCLRAMGAQHVDYLVPNRFEFGYGLTPEIVAVAAKLNPNLIITVDNGIASVEGVNAANALGIKVLV
TDHHLPPEQLPDAAAIVNPNQKGCEFGSKNLAGVGVIFYLLCALRSQLRASGWFEQRGIEPPNMASYLDLVALGTVADVV
PLDFNNRILVSQGIARMRQGVCIAGIRALFQVGGRNIERVQSTDLGFVVGPRLNAAGRLDDMSLGIKMLLTDNYTEALHL
AGELDSLNRERRQIEASMQHEAFKLLDELALDGEQTPMGVSLYQADWHQGVIGILASRIKDKLHRPTIAFADATDTEIKG
SGRSVEGVHLRDILDQVATENPGLLSKFGGHAMAAGLSLPKESFTAFAEAFDRCVSAHLGGEALTAKVITDGELPAHLMD
LATAEAIAHAGPWGQNFPEPLFYGEFLLVQQRIVGEKHLKMVVTPSEYSGLAIDAIAFNVDVASWPNNSVERVRLAYVLD
VNEFRGNKSLQLRVAHLEALI

Sequences:
NA

Specific function: NA

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA