Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 90020720

GI number:

Start: 1373072

End: 1374787

Strand: Reverse

Name: Not Available

Synonym: Sde_1073

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020721

Following gene: 90020712

Centisome position: NA

GC content: NA

Gene sequence:

>1716_bases
ATGATAAACATCGAACAAGCTGTTACTAACAAGTTTCCTAAGTTTGCTAGCCAACCGGCTATTATCCGCAAACCTACACT
CTCCCTCCTGCGCCGACTTACCCACGAAACTGAAATTAATGCCTTTTTGCGCGACAACCAAGATGCCATTGGCTTTGAGT
TTATCGACCGCGTACTGGAATATTTCGACTTTAGCTATCGCGTAAGCGCTAGAGATAAAAGCAATATTCCCGCTGCTGGT
CGCGTAGTTATTTTCGCCAACCACCCCATTGGCTCTCTCGATGGCTTAGCTATTTTGCGGCTTATTGGCGAAGTGCGCCA
AGATGTAAAAATTATCGCTAACGATATGCTCAGCCATTTCTCTGCCCTAGATAACCTGATTATTCCACTGGATAACATGA
CCGGCAGCAGTGCCCGCCGCAGCTACAAGCGCGTAATGCAGGCACTAGAAAAAGAGCAGGCGATTATTGTATTCCCTGCG
GGTGAGGTATCCCGCGCCAGTGCTAATGGTGTGCGCGATTCTCGCTGGCTGCCCGGCTTTTTACATTTTGCTCGCCGCGG
CAAGGCGCCGTTGCTGCCGGTGCATATCAAAGCAAAAAACTCATTACTCTTTTACGGCGCCAGCATGCTGTTTAAGCCAC
TTGGCACTGCACTACTGGCAAGAGAAATGTTTAACAAGCAATCGCGCACCATTAACTTTCGTGTCGGCGGTATGATTCCG
CCAGCGGCTTTAGAATCAGACCAGTTACACGATCGCACACTAGTAAAACGTCTCAAAAAGCATTTATATAAAGTTGGCTC
GCAAAAACGCCCTATATTTCAAAGTGAACGCACCATAGCCCACCCAGAAGATCGTCAGCGTTTACAAGAGGAATTGCGCG
ATGCAAAGCTACTGGGCGAGACCCGAGACAACAACCGCATCTACTTAGTAAGTTACAAACAAGATTCCGCAGTTATTCGC
GAGATTGGCCGCTTGCGCGAACTCGCCTTTAGAAAAGTAGGTGAAGGTACAGGTAAAAAGCGCGATTTAGATGCGTTCGA
TAGCCACTATAAGCATTTAGTATTGTGGGATAGAGAAAACCTAAAAATTGCAGGCTCTTATCGCCTAGGCGAGGGCAAAC
ACATCTACGATACACTTGGTGAAAGCGGCTTTTACACCAGCACGCTATATGACTTTAAACCAGAATTTAAAAAATATTTA
GAGCAAGGTGTAGAGTTAGGCCGCAGCTTTGTAAACCCTGAATACTGGGGTAAAGCGAGCCTTGATTATTTGTGGCAAGG
GCTGGGAACATTTTTAGCTAACAACCCCGAAGTACGCTATTTAATTGGGCCAGTAAGTATGAGCGCAGATTACCCGCGCG
AGCTTATGGACCAACTGGTTTATTTTTACCGCCGTTACTATGCATGCCCCGAAAATTTAGCGGTAGCGAATCACCCCTAT
ACTTTAACGGCCGAGCAAAACGCAAAGTTTGAAGCTCTGTTTGAAAATAAAGAGCGCGATGAAGCCTTCGATTTTATGCA
GGCAAATTTTATGGCAGTCGGCCACAAACTTCCTATGCTATTTAAACAATACACAGCACTCTTTGAAGAAGGTGGTTTTC
AGTCGGTAGTATTTAGCGTAGACCCAGACTTTGGCGACTGCCTAGACGGTTTATGCATGTGCGACATTACTAAGCTTAAA
GCCAGTAAATATAAGCGTTATATTGGGGGGAAATAA

Upstream 100 bases:

>100_bases
TCACGAATATGTAACCAGAAATTCACATATCAGATTTAGCCTGACTTGGGCGATAAAGCCTAGAGAACATGCCTAACATT
TGGTGGGAAAAGGATCTGGT

Downstream 100 bases:

>100_bases
TCTCTCTAATTGCTAGCCGCTAAACTCTCGTTAAAATTACACGTTAATTGCAGTTAGCTGTTGCAAACCATTGAGAATTA
AGAAAAATGTGGCAGCGGAA

Product: DNA polymerase III subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>571_residues
MINIEQAVTNKFPKFASQPAIIRKPTLSLLRRLTHETEINAFLRDNQDAIGFEFIDRVLEYFDFSYRVSARDKSNIPAAG
RVVIFANHPIGSLDGLAILRLIGEVRQDVKIIANDMLSHFSALDNLIIPLDNMTGSSARRSYKRVMQALEKEQAIIVFPA
GEVSRASANGVRDSRWLPGFLHFARRGKAPLLPVHIKAKNSLLFYGASMLFKPLGTALLAREMFNKQSRTINFRVGGMIP
PAALESDQLHDRTLVKRLKKHLYKVGSQKRPIFQSERTIAHPEDRQRLQEELRDAKLLGETRDNNRIYLVSYKQDSAVIR
EIGRLRELAFRKVGEGTGKKRDLDAFDSHYKHLVLWDRENLKIAGSYRLGEGKHIYDTLGESGFYTSTLYDFKPEFKKYL
EQGVELGRSFVNPEYWGKASLDYLWQGLGTFLANNPEVRYLIGPVSMSADYPRELMDQLVYFYRRYYACPENLAVANHPY
TLTAEQNAKFEALFENKERDEAFDFMQANFMAVGHKLPMLFKQYTALFEEGGFQSVVFSVDPDFGDCLDGLCMCDITKLK
ASKYKRYIGGK

Sequences:
NA

Specific function: NA

COG id: COG3176

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA