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The map label for this gene is rpoB

Identifier: 90020571

GI number:

Start: 1187680

End: 1191765

Strand: Direct

Name: rpoB

Synonym: Sde_0924

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020570

Following gene: 90020572

Centisome position: NA

GC content: NA

Gene sequence:

>4086_bases
ATGGCTTACTCATATACTGAGAAAAAACGTATCCGAAAGGATTTTGGCAAGTTGCCAGACGTCATGGAAGTGCCATACCT
TCTGGCGATTCAACTAGATTCCTACAGAAAATTTACGCAGGCTGATACCCCTTTCGATCAAAGAAAGGATATGGGCTTGC
ACGCTGCATTTAAATCTATATTTCCAATAGTGAGCTATTCAGGTAATGCAGCACTTGAGTATGTCAGTTATGCCCTAGGT
AAGCCCGTTTTTGACGTAAAAGAATGTGTTTTGCGTGGCGCGACCTATGCAGTGCCTTTACGCGTTAAAGTTCGTTTGAT
TATCTACGATAAAGATTCGTCCAGTAAGGCGATCAAGGATATCAAAGAGCAAGAAGTCTACATGGGCGAAATTCCGCTTA
TGACAGACAATGGTACATTCGTAGTGAATGGTACCGAGCGAGTAATTGTATCTCAGTTACACAGATCTCCTGGTGTGTTT
TTCGAGCACGACAAAGGTAAGACCCACTCTTCGGGCAAGTTGCTCTACTCTGCACGCGTTATCCCTTACCGTGGCTCATG
GTTAGACTTCGAGTTCGACCCTAAAGATCTAGTTTTCGTACGTATTGACCGTCGTCGTAAGTTGCCTGCGTCTATTTTGT
TGCGCGCATTGGGCTATACCACCGAGCAAATGCTCGATATGTTCTACGAAACAAGCAAGTTCGGTCTTACCGAAACTGGT
GAGTGCGTACTTGAATTGGTTCCATCGCGTTTGCGCGGTGATGTAACAACGTTTGAAATTAAAGATAAAGACGGCAATTT
AATTGTTGAAGATGGCCGTCGTATTACTGCTCGTCATATTCGTCAGTTGGAAAAAGCTGGTGTAACCGAGCTAAGTGTTC
CGCACGAATATATGGTTGGTCGCGCATTAGCGAAAGATATTATTAATGCGGAATCCGGCGAAGTTCTATTTGAATGTAAC
ACCGAAATCACAGACGAAGTTCTTGCGGAGCTTGTTAAGTCTGGCGTTAAAGAATTTGAAACGTTGTACACCAACGAATT
AGATTGCGGTCCGTTTATTTCTGACACTTTGCGCAGCGACCCTGCTCGCACTCAGCTTGAAGCGTTGGTAGAAATCTACC
GCATGATGCGCCCGGGTGAGCCGCCAACAAAAGAGTCTGCAGAAACACTGTTCCAAAACTTGTTCTTCAGCTCTGAGCGC
TATGACCTTTCTGCTGTTGGTCGAATGAAGTTCAACCGCCGTTTGGGTCGTGATTCAGAAGTTGGTTCTGGAACGCTATC
TAATGAAGATATAGTTGATGTATTAAAAACGCTTATCGACATTCGCAACGGTAAAGGCGTGGTGGATGATATCGATCACC
TCGGTAACCGTCGTGTACGTTCTGTTGGCGAAATGGCCGAGAACCAATTCCGTGTTGGTTTAGTTCGTGTAGAGCGCGCT
GTTAAAGAGCGTCTATCTATGGCTGAAAGCGAAGGCTTAATGCCCCAAGATCTTATTAACGCTAAGCCTGTGGCTGCTGC
TGTTAAAGAGTTCTTTGGCTCGAGTCAGCTATCTCAGTTCATGGATCAAAACAACCCACTGTCAGAAGTTACGCACAAAC
GTCGTGTTTCCGCATTAGGCCCTGGTGGTTTGACGCGTGAGCGTGCAGGCTTTGAGGTGCGAGACGTACACCCGACTCAC
TACGGTCGTGTATGTCCTATTGAAACACCTGAAGGTCCAAACATTGGTTTGATTAACTCGTTGGCTACCTATGCGCGTAC
CAACAGTTACGGTTTCTTAGAAAGTCCTCACCGCAAGGTAGTTGACGGTAAAGTTACCGATGAAATCGAATACCTATCAG
CTATTAACGAAGCTAAATTCGTAATTGCACAGGCATCTGCTGCGCAAAACGAAAATGGCGAATTAACAGAAGAGTTGGTA
TCGGTACGATTCCAAAATGAATTTACCTTAAAAGGGCCAAGCGAAGTTCAGTACATGGACGTGTCTCCACGTCAGGTTGT
ATCTGTTGCTGCGTCTCTTATCCCGTTCCTAGAGCACGATGATGCTAACCGTGCATTGATGGGATCAAACATGCAGCGTC
AAGCTGTACCAACACTAAAGGCGCAAAAGCCGTTAGTGGGTACAGGTATGGAGCGCAATGTTGCTGCCGACTCTGGTGTA
TGTGTTGTTGCTAAACGCGGCGGTGTTATCGAGCGTGTTGATGCTGCTCGCATTGTTGTGCGTGTAGCCGACGACGAAGT
TGAAGCGGGTGAAGCAGGTGTAGATATTTACAACCTTACCAAATACACCCGTTCAAACCAGAATACGTGTATTAATCAGC
GTTCAATTGTACGCACTGGTGAGAAAGTATCTCGCGGTGACATTCTTGCAGACGGCCCATCCGTAGATTTGGGTGAGTTG
GCACTTGGGCAAAATATGCGTATCGCATTTATGCCTTGGAATGGTTACAACTTTGAGGATTCGATCCTCGTTTCTGAGCG
TGTAGTTCAGGAGGATCGTTTTACTACTATTCACATTCAGGAATTAACCTGTATTGCTCGTGACACCAAATTGGGTAGCG
AAGAAATTACAGCGGATATTCCAAACGTAGGTGAAGGTGCTCTATCCAAGTTGGATGAGTCCGGTATTGTTTACGTGGGT
GCGGAAGTAGCTTCTGGCGATATTCTTGTTGGTAAAGTTACGCCTAAAGGTGAAACGCAGCTAACACCAGAAGAAAAGCT
CTTACGTGCAATTTTCGGTGAGAAAGCGTCCGACGTAAAAGATACTTCATTGCGCGTGCCTTCAAGTGTTAAGGGTACGG
TTATAGATGTGCAGGTATTTACGCGCGATGGTTTAGAAAAAGACCAGCGTTCACGTGATATCGAAAAAGCACAGCTAGAT
CAAATTCGTAAGGACTTAAACGAAGAGTACCGTATTGTTCAAGGCGCTACTTTTGAGCGTTTACGCGCTGCACTTGTGGG
TAATACCGCAATGACAGGCAAGGGCGTTGTTAAAGGGCAGCCGGTAACGGATGAGATGCTAGACGAGCTTAGCCATGATG
ATTGGTTCAAGATTCGTATGAATGACGATGTGCTCAATGAGCAAATCGATGCCGCTGAAGTTGCTTTGGCAGAGCGTCGT
AAAGAGCTCGATGATCGCTTCGAAGATAAAAAAGGCAAGTTGGAAACCGGTGATGATCTGGCTCCAGGTGTGTTGAAAAT
TGTTAAGGTTTACTTGGCAATTAAACGACGCATTCAGCCTGGTGATAAGATGGCCGGTCGTCACGGTAACAAGGGTGTTA
TCTCTGTGATCATGCCTGTTGAAGATATGCCATACGACGAAAATGGTAACCCCATTGATATCGTATTGAACCCGCTTGGT
GTTCCTTCTCGAATGAACGTTGGTCAGGTTTTAGAGATGCACTTAGGTCTTGCAGCTAAGTCGCTAGGTGAAAAGATTGA
TGAAATGTTGAAGCAGCAAAAAGCTGTTGCAGAAATTCGCCAGTTCTTGGATCAAATCTATAACCAAATAGGCGAGTCGT
ATAAAGCTGAAGAGCTCGATACGTTTAGCGACGACGAAATTATCGAGTTAGCTAACAACTTGCGTGACGGCGTGCCTATG
GCTACCCGTGCGTTCGATGGTGCTAAAGAGAAAGAAATTAAGCAATTGTTAACCTTGGGTGGTATGCCGGATTCAGGTCA
GATGACTTTGTTTGATGGTCGTACTGGTGATCCGTTCCAGCGTCCAACAACTGTGGGCTATATGTATATGCTCAAGTTGA
ACCACTTGGTTGACGATAAAATGCACGCCCGTTCGACTGGTTCCTACAGCCTTGTTACTCAGCAGCCGCTGGGTGGTAAA
GCGCAGTTTGGTGGTCAGCGATTTGGTGAGATGGAGGTGTGGGCCCTCGAAGCATATGGTGCAGCGTATACGTTGCAAGA
AATGCTAACCGTTAAATCGGATGACGTGGCCGGTCGTACTAAGATGTATAAAAACATCGTAGACGGTGACCACCGCATGG
AGCCTGGCATGCCTGAGTCCTTTAACGTATTGGTTAAAGAGATTCGCTCACTCGGTATTAATATCGAGCTAGAGCAGGAC
AACTAA

Upstream 100 bases:

>100_bases
GACACCCCATAAAACTTCCAACACGATTGTAAGCGCTTGCCAGGCGGTGAAATCGTCGTCCCACATTGATATTGATCCGT
GAACCAGCTGAGGAACACTG

Downstream 100 bases:

>100_bases
TCGCTTAATTTATTTGGCATACACACGGTGGTGGACGGTACACCTAAAAGATTTACCGTCCACTGTGCATAAGCACCCAC
TGGAGGAATAGCGTTGAAAG

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1361_residues
MAYSYTEKKRIRKDFGKLPDVMEVPYLLAIQLDSYRKFTQADTPFDQRKDMGLHAAFKSIFPIVSYSGNAALEYVSYALG
KPVFDVKECVLRGATYAVPLRVKVRLIIYDKDSSSKAIKDIKEQEVYMGEIPLMTDNGTFVVNGTERVIVSQLHRSPGVF
FEHDKGKTHSSGKLLYSARVIPYRGSWLDFEFDPKDLVFVRIDRRRKLPASILLRALGYTTEQMLDMFYETSKFGLTETG
ECVLELVPSRLRGDVTTFEIKDKDGNLIVEDGRRITARHIRQLEKAGVTELSVPHEYMVGRALAKDIINAESGEVLFECN
TEITDEVLAELVKSGVKEFETLYTNELDCGPFISDTLRSDPARTQLEALVEIYRMMRPGEPPTKESAETLFQNLFFSSER
YDLSAVGRMKFNRRLGRDSEVGSGTLSNEDIVDVLKTLIDIRNGKGVVDDIDHLGNRRVRSVGEMAENQFRVGLVRVERA
VKERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTH
YGRVCPIETPEGPNIGLINSLATYARTNSYGFLESPHRKVVDGKVTDEIEYLSAINEAKFVIAQASAAQNENGELTEELV
SVRFQNEFTLKGPSEVQYMDVSPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLKAQKPLVGTGMERNVAADSGV
CVVAKRGGVIERVDAARIVVRVADDEVEAGEAGVDIYNLTKYTRSNQNTCINQRSIVRTGEKVSRGDILADGPSVDLGEL
ALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELTCIARDTKLGSEEITADIPNVGEGALSKLDESGIVYVG
AEVASGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSSVKGTVIDVQVFTRDGLEKDQRSRDIEKAQLD
QIRKDLNEEYRIVQGATFERLRAALVGNTAMTGKGVVKGQPVTDEMLDELSHDDWFKIRMNDDVLNEQIDAAEVALAERR
KELDDRFEDKKGKLETGDDLAPGVLKIVKVYLAIKRRIQPGDKMAGRHGNKGVISVIMPVEDMPYDENGNPIDIVLNPLG
VPSRMNVGQVLEMHLGLAAKSLGEKIDEMLKQQKAVAEIRQFLDQIYNQIGESYKAEELDTFSDDEIIELANNLRDGVPM
ATRAFDGAKEKEIKQLLTLGGMPDSGQMTLFDGRTGDPFQRPTTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKMYKNIVDGDHRMEPGMPESFNVLVKEIRSLGINIELEQD
N

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA