Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020335

GI number:

Start: 877133

End: 883915

Strand: Direct

Name: Not Available

Synonym: Sde_0688

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020334

Following gene: 90020336

Centisome position: NA

GC content: NA

Gene sequence:

>6783_bases
ATGAGTAAATCCAGCCCTATTGCCGTTGTTGGTGTGAGTAGTATCTTTCCCGGTAGCCCGCAAGTATCTGGTTTTTGGCG
AGATATTTTGCAAGGCAAAGATCAAATACGAGAAATACCAGAAAGCTACTGGTTGATAGACGATTACTACGATAAAAACC
CCCAAGCGCAAGATAAAACCTACGGGCGCAGAGGGGCGTTTATCGAGTCGGTAGCATTCGACTGTATTGAGCACGGTATT
TTACCTTCGCAACTGCAAGATATAGACACAGTGCAATTGCTTGCACTAGTGGCTGCGCAGCATGTGTTACGCGATGCGGC
CAAGGGCGATTATAAGCATTTAGATAAATCTCGCATGAGCGTTATTTTAGGTGTGGCTGGGGGCACAGAGCAGCTAGTGC
AAATGGGCGCGCGATTGCAAAAACCGGTATGGCTGAAGTCGCTACGAGAAGCCGGCATAGCAGAAAATTTAGCGCAAGAA
ATTTGTCAGCGCATAGCCGACCACTACGTACCTTGGTCGGAAGCTAGCTTTCCTGGTTTATTGGGTAACGTTGTGGCTGG
ACGAATTGCCAATCGCTTGGATTTAGGTGGTACCAATTGCGTGGTGGATGCGGCCTGTGCAAGTTCCTGCTCTGCCTTGG
CGATGGCCGTAAACGAATTACATCTGGGCCATTCCGATTTCGTAATAACCGGCGGCGCAGATGCACTTAACGATATATTA
ATGTATATGTGCTTTAGTAAAACGCCAGCGCTATCCGCTACGGGGGATTGTAGGCCATTTTCAGATGCTGCAGATGGCAC
TATTCTTGGCGAAGGTGTAGGCATGCTGGCACTGCGCAGGTTAGAAGATGCCGAGCGAGATGGCGATACTATTTATGCTG
TTATAAAAGGTGTGGGCTCAAGTTCAGATGGCGCAGGTACTGCGGTGTATGCGCCGGTAAGTGAAGGTCAAGCAAAGGCA
ATTAATCGCGCATACACACAAGCAGATTTTTCTGCAAATACCATTGAGCTAATTGAAGCACACGGTACCGGTACCAAGGC
TGGAGATAAAGCAGAATTTAACGGGTTAAATATTGCTTTTGGCGCAAGCGAGCAAAGCCAAAGCAATAATCAGTGGTGTG
CGCTTGGCTCGGTAAAAAGCCAAATAGGCCACGCAAAAGGTGCCGCCGGTGCAGCGGCTTTAATTAAAGCGGTAATGGCT
CTGCACCATAAAGTACTGCCACCAACCATTAAAGTGAATCAACCAAACCCCGCCTTTAATATAGAGCAGACCCCTTTTTA
TATAAATACTAAATTGCGGCCCTGGGTGCGCAACAGCCATTACCCGCGCCGAGCGGGGGTATCCTCGTTTGGCTTTGGTG
GCAGTAATTTTCACGTAGCGTTAGAAGAATATACAACTGCGCAAGCCAACCCGCGTTTGCACATGGTATCCGATACTCAC
CTAGTGCTGGCTGCTGGTGGTAGCCACGAAGAGTTATTCCGTAAACTAATAAACACAGTAGACAATTTACCCAGCGATAA
AGATGCGCTGGAGTATTTTGCTAGGCAATCGCAAGAAACCGTACAAGCAAGCCAGCCTTACCGCGTAGCATTTGTTATTG
ATAGTGTTGAGCAGCTGCGCCAGCTTATTGCGCAAGCAAAACAGCAAACACAAGCCAATACCGCTAAAAATGTTAATTCG
CCCAGTGGTTGGTTTTACGGTGTTTCTCAGGGTGCTACCGCCGGCGAGAGTGAACATGTTGGCTACGGAAAAATTGCGTG
TCTTTTCCCCGGGCAGGGCAGTCAATATGTAGATATGTGTGCGCCATTGGCAACGGTATTTCCCGCTGCGCGCGAAGTTT
GGGATTCCGCCGAGTCGAATTTTGCTGAAGGCGAATCGCTATCTCGTGTTGTATTTCCTATTTCTACTTTTAGTGAGGCG
GCCGCGCAAAGCCAACGTGATTGGTTAAATCAAACAGAGTGGGCACAGCCTGCTATTGGTGCCGCTAGCTTAAGTGTATG
GGCGCTATTAAAAAAACTAGGTTTAAATCCAGAAGCCTTTGCTGGCCATAGTTATGGCGAACTTACCGCGTTAAGCGCCG
CCGGTGTACTTTGCGAGCAAAGTTTAATTGCCACTGCGCGCGCGCGTGGGTTGGCGATGCGTGATGCATCTGCTTCTACC
AGTGGGGCAATGGCTGCGGTGCATGCCAGTGTGAATACCGTTAATGAGTTGTTAGAAAAATTATTAAGTGAAGCAAAGCA
AGCGGGTAACGCTAACCCTATTATTACGCTGGCTAATATTAACTCGCCGTCGCAGGTTGTTATTAGCGGTGCAACGGAAG
TGGTAGACGCCTTTACCGAACTGTGCGAACAAGAAAATATTCGTGTTAGCAAATTGCCTGTTTCAACTGCATTTCATTCC
CCGATTGTGGCGCAAGCGGTAGCCTCGCTGGCAGATCACCTAAAAACCACACCATTTAACCCAATACAAAAAACGGTGTA
TGCCAATAAAACGGCACAACCGTATCCAAGCGATGTTACGCAACAGCAGCAATTACTTACCCAGCAATTAATATCACCTG
TGCGTTTTCAAGAGCAAATCGAGGCCATGTACGCACAGGGCTACAGAACATTTATTGAGGTGGGGCCAGGTAATGTACTT
ACCGGTTTGGTCAGTGCAATATTGCAAGGCAAAAATCACGTCGCTATCGCGACCGATAAAAAAGCAAATAATTCCTTAGC
GACCTTCTGGAAGGCGCTAGGCCAATTAACCTGCCTAGGGGTTAAGTTAGATTTTTCTGCACTGTGGCAAGATTTCCGCA
AACAAACGGCGCCCGCGGACCGTGTGAAACCTAAAATGGCGTTGCCCATAACGGGCATTAATTACAATCGTGTATACCCT
CCAAAAAATGGTGCAGCAGGTATTCCTCCAGCAAATCCAGAAGAGCTGCTGGCGCAGTCTGTCAATGCTCAGTCCACATC
TGCTCAGCCCATAAAAACAGAGCAAGATAATTTACATTCCATTAATAAAAATGATGGCGTATTGCTTAATACCCCTAACG
CGCAGCCCCATGCCGCTAGCTCGCTTAAGAGCAACTCGGTGGATACTAGCTCGATGGTTCCTAACCCTATAGCCGCAATG
CCAACTACCAGTAGCCATCAAGCCCATTTGCAAACAGAGGATAGTCCCATTTCTAATTTCACCCCTAATCAAAAAAGCGA
ATGGCTGGCGGCATTCGAAAATATACAAAAACAAACTAACGAAACTCATCGTCAGTTTCTGCAAATGAGCGAGCAAGCCT
TAGCACAATTAGGGCAGTTAGTTGCATCAGGTTCGGCTGCGCCAGTAGATACTAGTTCAGTTAGCGCTCAGGCAGAGCAC
ACTATAGCCGTTAACAACCTAGACGTTTCTGCACATGCTCAATATCAGCAACCGCAATCGGCAATACAAAGCGAGCCAAA
CGTAGCGCCCGCAGGCGATGAAATAGTTAAAACAGTGGCGGAGCCCGCAGCACCTAGCGCCATGCCATTACCAGTTACGC
AAAATCTTGATGTAGCAGAGGTTATGCTAAATGTAGTGGCAGATAAAACCGGCTACCCGAGAGAAATGCTGGCTTTGTCT
ATGTCGTTAGAAAATGATTTGGGTATCGACTCCATTAAAAGAGTGGAAATATTATCTGCAACCTTAGACGTTGTGCCAAA
CCTGCCAGAAGTAAACCCTTCAGATATGGCGGTACTAAGCACACTCGAAGAAGTTGTGCAGTTTATTCAGCGCAAAATGG
CAGAAGTGGCGCCAAGCTCCAACTCAATGGCTACACCACAAAACCAAGTAAGCGCACCGGTTGAAAGCCCGCAAATACCA
AGCCCAGCGCAGAAAGTAGTAGCCGATATAAATGTAAACGACTTGCTTATGCAAGTAGTAGCAGACAAAACAGGTTACCC
GCTAGAGATGCTTAATCTCGATATGCATTTGGATGCAGATTTAGGTATAGATTCTATTAAACGGGTAGAAATTTTATCTG
CGGCAACAGAGCAATTAGATTCCTTGCCAGAGCTCGATAACAGCGTAATGGCAGGCCTTAATACACTGGCAGAAATTTCG
CGATATATCACTGCGCAGCTAAGTGCAGCCAGTGGCGTTGCAAGTGAGGCAATAGCACAGCCTGCTACGCATGAAGTTTC
TACCCCCTCGATCACATCCAGCGACAACACTGTAGATATTCAGCACATAATGTTAAGCGTTGTGGCAGAAAAAACGGGCT
ACCCGGTAGATATGCTAGAGCCAAGCATGGATTTAGAAAACGACTTAGGCATAGATTCTATCAAACGCGTAGAAATACTT
TCTGCGACCCTTGAGAAGGTACCTAATTTGCCAGAGTTCGATGCCGCGAGTATGAGTAGTCTAAACACTCTTGCTGAGAT
AATTGAATTTATAAAAAAGCAATTAGGCAGTACTAAGGATGAAACTAATCCAAGTGCTGCCGTAGTCGAAAAAGAATTAC
AGGCTGCCGCAACTAACAATAATTTATTAAGTCGTTACGAATTAGAGCTGCTGCAGCTACCAAGGCCAAATTTTATGCCG
CATCAATTGATGCAGCCACTAGTCATTGTGCCTGCTAATTCCCCCTGCGCTCAGCCACTATGCGACGCGCTAAAGGCGCG
CGGTTTGCAGGCCGAGGTTGCTCAGCGAGTAAATGAAAACCACAAGGCCGTAATTAGTTTAAATGGTTTGCAAAAATTTA
AACACAGTAAAGATGCACTAGCGATTAACCGCGTTATTTTTGAGCAAGCCTGCACATTGGCTCCAGTGCTAGAAAAAGAA
GTCGGAGTATTTATTGCTGTACAGAACACTTCGGGCGACTATGGCCAAAGCGGTGCCTCAGGCGTGCAGAGTTGGTCTGG
TGGTATCAGTGGCCTAGTTAAAACAGCTGCGCAAGAATGGCCCGCTGCGTTAGTAAGAAGTATTGACATTAATATAGAAA
AAATCACGCTTGCTGAGCTTGTTAATAATCTTGCACAAGAAATTGTCGATGGCGGTATTCAGCGCGAAGTAGCGTTAGGC
TTGTATGGTAAGCGTTGTGTGCCTGTTAGCGTAAAAGCCAGTGTGCAACAAGGCAGCATGCCACTACATAAAGACGATGT
GATATTAGTTACTGGCGGTGCGCGGGGCGTCACAGCGGAAGCCATATTAGCTTTAAGTAAACAATTACCTTTAAAGTTTG
CATTGCTAGGCCGCTCGCCGGTAATTGATGTAAGCCGGTTTGAGCATTGTGCGGATGAAGCCGCAATAATGCGAGCAATT
CTAGCCGAAGCAAAGGCGGCAGGAATTCAAATGCTCCCTGCAGAATTAAAGCGAGAAGTGGGGCTTGTGGTTTCTTCTAG
GGAAGTAAGCAAAACGTTAAGCAATCTACAGGCAGCTGGCTCACAGGTAAGTTATTTCCCGTGTGATATAAACAATCAAG
ACCAACTAGCCGAAGTGGTAAAACAAATTCAAACGCAGTTGGGGCCCATTAGTGGGGTTGTTCACGGAGCGGGTGTATTG
GCCGATAAATTATTATCTGGCAAAAAAATTGAGCACTTTGATGCGGTGTTTGGTACCAAAGTGCAGGGGCTGCATAACTT
ACTCAATGTACTAACGGATCAAACATTAAAAGTGCTTTGTTTGTTTTCTTCGGTTGCTGCGCGAGCGGGCAATATTGGTC
AGAGTGATTACGCAATGGCTAATGAAGTACTTAATCGTGTGGCCGCTTGGTATAGCGCAGCAAATAACACTAAAGTAGTG
GCTATTAACTGGGGGCCGTGGGAAAGCGGTATGGTAACGGATGCGCTCAAACAGAAGTTTGCGCAAATGGGGGTTGAGCT
AATTCCCTTGCACAGCGGTGCACAATTTTTTGTAGATGAGCTACAACACAGCCAAATTAATACCGAGGTCGTTTACGGTG
GCATGCCTCTTAATAAACCGTTGGCCAACCCAGGTGCTTTGTGTAGCCATAAAATGCAGGTGGTGGCGAGTTTACAATCT
CTGCCCCATTTAGAAAGCCACAAGGTTCGCGGTGAAATAGTACTCCCTGTAGTACAGGTGGTAGATTGGTTTAGGTCTGC
CATGCTATCTGTGCTGCCAAGTTTAAAGGCGTTTACACTGTTAGATTTAAAAGTGCTAAAAGGCATTGTACTTAGCGAGC
CTCACGTTACTTTTACAATCAACTTGGAAGAACTGCCCAACTCAACGCTCTTTTCGCTTGGTCTTACCGATGCCAATGGT
GTACTGCGCTATAGCGCAAACGTTAACTGTTTAGATAAAAGTTATACCGAAGCGAGTGGTGCCGGTGTGGGCGAATCCGG
GGAGGCGCCGTCTCGTGGCTTACTTAGCAAGCCAAGCAACCCCAGCTATACGCATTTTAACCCCTATAAAGAATTGTTGT
TTCACGGTGAACACTACCAGTCGATTACGCGAATTGGCGCTTTAGAAGATGATAGTGCCGTGGCCGAATTAATAGGTACA
AATCAATTAAATTGGGCTGACTATGGTGCAAGTATAGATCAAGCTATATTGGATGGCGCTTTGCAACTTGCATTGGTTTG
GGGGCAAAAGCATATCAATCGCGAAAGCCTGCCAATGGGGTTCGACACTATGCAAATAAATCACTTTGGTACAGTACAGG
GCGCAGTGCGCTGTTATTTACAGCGTGAAAAACACGATAGTGTGAGCACGGTTTCCAATATTTGGTTATTAGATTCCGCC
GATACAGTACTTGCTTGCATACGCGGTTTGCGTATGTACGCTGTTAACGAAAGCTTGCGGTAA

Upstream 100 bases:

>100_bases
AAAATGCCTTTGCTGTGGTTCCGCAAAAGCTATAGCACCTAATGCAGTTTGACGTGCCCCTTTAAAAACGAAATTTTTAG
CATAGCCATCGAGTTTAAAT

Downstream 100 bases:

>100_bases
ATTAGTTATGGCGTATAACCATTTTGAGCCTATCGCTATTGTCGGCGAGGGGTGCGTATTGCCCAGCGTAAATTCTGTAG
AGGATTTATGGCGAGTTACA

Product: polyketide synthase module-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>2260_residues
MSKSSPIAVVGVSSIFPGSPQVSGFWRDILQGKDQIREIPESYWLIDDYYDKNPQAQDKTYGRRGAFIESVAFDCIEHGI
LPSQLQDIDTVQLLALVAAQHVLRDAAKGDYKHLDKSRMSVILGVAGGTEQLVQMGARLQKPVWLKSLREAGIAENLAQE
ICQRIADHYVPWSEASFPGLLGNVVAGRIANRLDLGGTNCVVDAACASSCSALAMAVNELHLGHSDFVITGGADALNDIL
MYMCFSKTPALSATGDCRPFSDAADGTILGEGVGMLALRRLEDAERDGDTIYAVIKGVGSSSDGAGTAVYAPVSEGQAKA
INRAYTQADFSANTIELIEAHGTGTKAGDKAEFNGLNIAFGASEQSQSNNQWCALGSVKSQIGHAKGAAGAAALIKAVMA
LHHKVLPPTIKVNQPNPAFNIEQTPFYINTKLRPWVRNSHYPRRAGVSSFGFGGSNFHVALEEYTTAQANPRLHMVSDTH
LVLAAGGSHEELFRKLINTVDNLPSDKDALEYFARQSQETVQASQPYRVAFVIDSVEQLRQLIAQAKQQTQANTAKNVNS
PSGWFYGVSQGATAGESEHVGYGKIACLFPGQGSQYVDMCAPLATVFPAAREVWDSAESNFAEGESLSRVVFPISTFSEA
AAQSQRDWLNQTEWAQPAIGAASLSVWALLKKLGLNPEAFAGHSYGELTALSAAGVLCEQSLIATARARGLAMRDASAST
SGAMAAVHASVNTVNELLEKLLSEAKQAGNANPIITLANINSPSQVVISGATEVVDAFTELCEQENIRVSKLPVSTAFHS
PIVAQAVASLADHLKTTPFNPIQKTVYANKTAQPYPSDVTQQQQLLTQQLISPVRFQEQIEAMYAQGYRTFIEVGPGNVL
TGLVSAILQGKNHVAIATDKKANNSLATFWKALGQLTCLGVKLDFSALWQDFRKQTAPADRVKPKMALPITGINYNRVYP
PKNGAAGIPPANPEELLAQSVNAQSTSAQPIKTEQDNLHSINKNDGVLLNTPNAQPHAASSLKSNSVDTSSMVPNPIAAM
PTTSSHQAHLQTEDSPISNFTPNQKSEWLAAFENIQKQTNETHRQFLQMSEQALAQLGQLVASGSAAPVDTSSVSAQAEH
TIAVNNLDVSAHAQYQQPQSAIQSEPNVAPAGDEIVKTVAEPAAPSAMPLPVTQNLDVAEVMLNVVADKTGYPREMLALS
MSLENDLGIDSIKRVEILSATLDVVPNLPEVNPSDMAVLSTLEEVVQFIQRKMAEVAPSSNSMATPQNQVSAPVESPQIP
SPAQKVVADINVNDLLMQVVADKTGYPLEMLNLDMHLDADLGIDSIKRVEILSAATEQLDSLPELDNSVMAGLNTLAEIS
RYITAQLSAASGVASEAIAQPATHEVSTPSITSSDNTVDIQHIMLSVVAEKTGYPVDMLEPSMDLENDLGIDSIKRVEIL
SATLEKVPNLPEFDAASMSSLNTLAEIIEFIKKQLGSTKDETNPSAAVVEKELQAAATNNNLLSRYELELLQLPRPNFMP
HQLMQPLVIVPANSPCAQPLCDALKARGLQAEVAQRVNENHKAVISLNGLQKFKHSKDALAINRVIFEQACTLAPVLEKE
VGVFIAVQNTSGDYGQSGASGVQSWSGGISGLVKTAAQEWPAALVRSIDINIEKITLAELVNNLAQEIVDGGIQREVALG
LYGKRCVPVSVKASVQQGSMPLHKDDVILVTGGARGVTAEAILALSKQLPLKFALLGRSPVIDVSRFEHCADEAAIMRAI
LAEAKAAGIQMLPAELKREVGLVVSSREVSKTLSNLQAAGSQVSYFPCDINNQDQLAEVVKQIQTQLGPISGVVHGAGVL
ADKLLSGKKIEHFDAVFGTKVQGLHNLLNVLTDQTLKVLCLFSSVAARAGNIGQSDYAMANEVLNRVAAWYSAANNTKVV
AINWGPWESGMVTDALKQKFAQMGVELIPLHSGAQFFVDELQHSQINTEVVYGGMPLNKPLANPGALCSHKMQVVASLQS
LPHLESHKVRGEIVLPVVQVVDWFRSAMLSVLPSLKAFTLLDLKVLKGIVLSEPHVTFTINLEELPNSTLFSLGLTDANG
VLRYSANVNCLDKSYTEASGAGVGESGEAPSRGLLSKPSNPSYTHFNPYKELLFHGEHYQSITRIGALEDDSAVAELIGT
NQLNWADYGASIDQAILDGALQLALVWGQKHINRESLPMGFDTMQINHFGTVQGAVRCYLQREKHDSVSTVSNIWLLDSA
DTVLACIRGLRMYAVNESLR

Sequences:
NA

Specific function: NA

COG id: COG3321

COG function: function code Q; Polyketide synthase modules and related proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA