| Definition | Saccharophagus degradans 2-40 chromosome, complete genome. |
|---|---|
| Accession | NC_007912 |
| Length | 5,057,531 |
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Identifier: 90020335
GI number:
Start: 877133
End: 883915
Strand: Direct
Name: Not Available
Synonym: Sde_0688
Alternate gene names: NA
Gene position: NA
Preceding gene: 90020334
Following gene: 90020336
Centisome position: NA
GC content: NA
Gene sequence:
>6783_bases ATGAGTAAATCCAGCCCTATTGCCGTTGTTGGTGTGAGTAGTATCTTTCCCGGTAGCCCGCAAGTATCTGGTTTTTGGCG AGATATTTTGCAAGGCAAAGATCAAATACGAGAAATACCAGAAAGCTACTGGTTGATAGACGATTACTACGATAAAAACC CCCAAGCGCAAGATAAAACCTACGGGCGCAGAGGGGCGTTTATCGAGTCGGTAGCATTCGACTGTATTGAGCACGGTATT TTACCTTCGCAACTGCAAGATATAGACACAGTGCAATTGCTTGCACTAGTGGCTGCGCAGCATGTGTTACGCGATGCGGC CAAGGGCGATTATAAGCATTTAGATAAATCTCGCATGAGCGTTATTTTAGGTGTGGCTGGGGGCACAGAGCAGCTAGTGC AAATGGGCGCGCGATTGCAAAAACCGGTATGGCTGAAGTCGCTACGAGAAGCCGGCATAGCAGAAAATTTAGCGCAAGAA ATTTGTCAGCGCATAGCCGACCACTACGTACCTTGGTCGGAAGCTAGCTTTCCTGGTTTATTGGGTAACGTTGTGGCTGG ACGAATTGCCAATCGCTTGGATTTAGGTGGTACCAATTGCGTGGTGGATGCGGCCTGTGCAAGTTCCTGCTCTGCCTTGG CGATGGCCGTAAACGAATTACATCTGGGCCATTCCGATTTCGTAATAACCGGCGGCGCAGATGCACTTAACGATATATTA ATGTATATGTGCTTTAGTAAAACGCCAGCGCTATCCGCTACGGGGGATTGTAGGCCATTTTCAGATGCTGCAGATGGCAC TATTCTTGGCGAAGGTGTAGGCATGCTGGCACTGCGCAGGTTAGAAGATGCCGAGCGAGATGGCGATACTATTTATGCTG TTATAAAAGGTGTGGGCTCAAGTTCAGATGGCGCAGGTACTGCGGTGTATGCGCCGGTAAGTGAAGGTCAAGCAAAGGCA ATTAATCGCGCATACACACAAGCAGATTTTTCTGCAAATACCATTGAGCTAATTGAAGCACACGGTACCGGTACCAAGGC TGGAGATAAAGCAGAATTTAACGGGTTAAATATTGCTTTTGGCGCAAGCGAGCAAAGCCAAAGCAATAATCAGTGGTGTG CGCTTGGCTCGGTAAAAAGCCAAATAGGCCACGCAAAAGGTGCCGCCGGTGCAGCGGCTTTAATTAAAGCGGTAATGGCT CTGCACCATAAAGTACTGCCACCAACCATTAAAGTGAATCAACCAAACCCCGCCTTTAATATAGAGCAGACCCCTTTTTA TATAAATACTAAATTGCGGCCCTGGGTGCGCAACAGCCATTACCCGCGCCGAGCGGGGGTATCCTCGTTTGGCTTTGGTG GCAGTAATTTTCACGTAGCGTTAGAAGAATATACAACTGCGCAAGCCAACCCGCGTTTGCACATGGTATCCGATACTCAC CTAGTGCTGGCTGCTGGTGGTAGCCACGAAGAGTTATTCCGTAAACTAATAAACACAGTAGACAATTTACCCAGCGATAA AGATGCGCTGGAGTATTTTGCTAGGCAATCGCAAGAAACCGTACAAGCAAGCCAGCCTTACCGCGTAGCATTTGTTATTG ATAGTGTTGAGCAGCTGCGCCAGCTTATTGCGCAAGCAAAACAGCAAACACAAGCCAATACCGCTAAAAATGTTAATTCG CCCAGTGGTTGGTTTTACGGTGTTTCTCAGGGTGCTACCGCCGGCGAGAGTGAACATGTTGGCTACGGAAAAATTGCGTG TCTTTTCCCCGGGCAGGGCAGTCAATATGTAGATATGTGTGCGCCATTGGCAACGGTATTTCCCGCTGCGCGCGAAGTTT GGGATTCCGCCGAGTCGAATTTTGCTGAAGGCGAATCGCTATCTCGTGTTGTATTTCCTATTTCTACTTTTAGTGAGGCG GCCGCGCAAAGCCAACGTGATTGGTTAAATCAAACAGAGTGGGCACAGCCTGCTATTGGTGCCGCTAGCTTAAGTGTATG GGCGCTATTAAAAAAACTAGGTTTAAATCCAGAAGCCTTTGCTGGCCATAGTTATGGCGAACTTACCGCGTTAAGCGCCG CCGGTGTACTTTGCGAGCAAAGTTTAATTGCCACTGCGCGCGCGCGTGGGTTGGCGATGCGTGATGCATCTGCTTCTACC AGTGGGGCAATGGCTGCGGTGCATGCCAGTGTGAATACCGTTAATGAGTTGTTAGAAAAATTATTAAGTGAAGCAAAGCA AGCGGGTAACGCTAACCCTATTATTACGCTGGCTAATATTAACTCGCCGTCGCAGGTTGTTATTAGCGGTGCAACGGAAG TGGTAGACGCCTTTACCGAACTGTGCGAACAAGAAAATATTCGTGTTAGCAAATTGCCTGTTTCAACTGCATTTCATTCC CCGATTGTGGCGCAAGCGGTAGCCTCGCTGGCAGATCACCTAAAAACCACACCATTTAACCCAATACAAAAAACGGTGTA TGCCAATAAAACGGCACAACCGTATCCAAGCGATGTTACGCAACAGCAGCAATTACTTACCCAGCAATTAATATCACCTG TGCGTTTTCAAGAGCAAATCGAGGCCATGTACGCACAGGGCTACAGAACATTTATTGAGGTGGGGCCAGGTAATGTACTT ACCGGTTTGGTCAGTGCAATATTGCAAGGCAAAAATCACGTCGCTATCGCGACCGATAAAAAAGCAAATAATTCCTTAGC GACCTTCTGGAAGGCGCTAGGCCAATTAACCTGCCTAGGGGTTAAGTTAGATTTTTCTGCACTGTGGCAAGATTTCCGCA AACAAACGGCGCCCGCGGACCGTGTGAAACCTAAAATGGCGTTGCCCATAACGGGCATTAATTACAATCGTGTATACCCT CCAAAAAATGGTGCAGCAGGTATTCCTCCAGCAAATCCAGAAGAGCTGCTGGCGCAGTCTGTCAATGCTCAGTCCACATC TGCTCAGCCCATAAAAACAGAGCAAGATAATTTACATTCCATTAATAAAAATGATGGCGTATTGCTTAATACCCCTAACG CGCAGCCCCATGCCGCTAGCTCGCTTAAGAGCAACTCGGTGGATACTAGCTCGATGGTTCCTAACCCTATAGCCGCAATG CCAACTACCAGTAGCCATCAAGCCCATTTGCAAACAGAGGATAGTCCCATTTCTAATTTCACCCCTAATCAAAAAAGCGA ATGGCTGGCGGCATTCGAAAATATACAAAAACAAACTAACGAAACTCATCGTCAGTTTCTGCAAATGAGCGAGCAAGCCT TAGCACAATTAGGGCAGTTAGTTGCATCAGGTTCGGCTGCGCCAGTAGATACTAGTTCAGTTAGCGCTCAGGCAGAGCAC ACTATAGCCGTTAACAACCTAGACGTTTCTGCACATGCTCAATATCAGCAACCGCAATCGGCAATACAAAGCGAGCCAAA CGTAGCGCCCGCAGGCGATGAAATAGTTAAAACAGTGGCGGAGCCCGCAGCACCTAGCGCCATGCCATTACCAGTTACGC AAAATCTTGATGTAGCAGAGGTTATGCTAAATGTAGTGGCAGATAAAACCGGCTACCCGAGAGAAATGCTGGCTTTGTCT ATGTCGTTAGAAAATGATTTGGGTATCGACTCCATTAAAAGAGTGGAAATATTATCTGCAACCTTAGACGTTGTGCCAAA CCTGCCAGAAGTAAACCCTTCAGATATGGCGGTACTAAGCACACTCGAAGAAGTTGTGCAGTTTATTCAGCGCAAAATGG CAGAAGTGGCGCCAAGCTCCAACTCAATGGCTACACCACAAAACCAAGTAAGCGCACCGGTTGAAAGCCCGCAAATACCA AGCCCAGCGCAGAAAGTAGTAGCCGATATAAATGTAAACGACTTGCTTATGCAAGTAGTAGCAGACAAAACAGGTTACCC GCTAGAGATGCTTAATCTCGATATGCATTTGGATGCAGATTTAGGTATAGATTCTATTAAACGGGTAGAAATTTTATCTG CGGCAACAGAGCAATTAGATTCCTTGCCAGAGCTCGATAACAGCGTAATGGCAGGCCTTAATACACTGGCAGAAATTTCG CGATATATCACTGCGCAGCTAAGTGCAGCCAGTGGCGTTGCAAGTGAGGCAATAGCACAGCCTGCTACGCATGAAGTTTC TACCCCCTCGATCACATCCAGCGACAACACTGTAGATATTCAGCACATAATGTTAAGCGTTGTGGCAGAAAAAACGGGCT ACCCGGTAGATATGCTAGAGCCAAGCATGGATTTAGAAAACGACTTAGGCATAGATTCTATCAAACGCGTAGAAATACTT TCTGCGACCCTTGAGAAGGTACCTAATTTGCCAGAGTTCGATGCCGCGAGTATGAGTAGTCTAAACACTCTTGCTGAGAT AATTGAATTTATAAAAAAGCAATTAGGCAGTACTAAGGATGAAACTAATCCAAGTGCTGCCGTAGTCGAAAAAGAATTAC AGGCTGCCGCAACTAACAATAATTTATTAAGTCGTTACGAATTAGAGCTGCTGCAGCTACCAAGGCCAAATTTTATGCCG CATCAATTGATGCAGCCACTAGTCATTGTGCCTGCTAATTCCCCCTGCGCTCAGCCACTATGCGACGCGCTAAAGGCGCG CGGTTTGCAGGCCGAGGTTGCTCAGCGAGTAAATGAAAACCACAAGGCCGTAATTAGTTTAAATGGTTTGCAAAAATTTA AACACAGTAAAGATGCACTAGCGATTAACCGCGTTATTTTTGAGCAAGCCTGCACATTGGCTCCAGTGCTAGAAAAAGAA GTCGGAGTATTTATTGCTGTACAGAACACTTCGGGCGACTATGGCCAAAGCGGTGCCTCAGGCGTGCAGAGTTGGTCTGG TGGTATCAGTGGCCTAGTTAAAACAGCTGCGCAAGAATGGCCCGCTGCGTTAGTAAGAAGTATTGACATTAATATAGAAA AAATCACGCTTGCTGAGCTTGTTAATAATCTTGCACAAGAAATTGTCGATGGCGGTATTCAGCGCGAAGTAGCGTTAGGC TTGTATGGTAAGCGTTGTGTGCCTGTTAGCGTAAAAGCCAGTGTGCAACAAGGCAGCATGCCACTACATAAAGACGATGT GATATTAGTTACTGGCGGTGCGCGGGGCGTCACAGCGGAAGCCATATTAGCTTTAAGTAAACAATTACCTTTAAAGTTTG CATTGCTAGGCCGCTCGCCGGTAATTGATGTAAGCCGGTTTGAGCATTGTGCGGATGAAGCCGCAATAATGCGAGCAATT CTAGCCGAAGCAAAGGCGGCAGGAATTCAAATGCTCCCTGCAGAATTAAAGCGAGAAGTGGGGCTTGTGGTTTCTTCTAG GGAAGTAAGCAAAACGTTAAGCAATCTACAGGCAGCTGGCTCACAGGTAAGTTATTTCCCGTGTGATATAAACAATCAAG ACCAACTAGCCGAAGTGGTAAAACAAATTCAAACGCAGTTGGGGCCCATTAGTGGGGTTGTTCACGGAGCGGGTGTATTG GCCGATAAATTATTATCTGGCAAAAAAATTGAGCACTTTGATGCGGTGTTTGGTACCAAAGTGCAGGGGCTGCATAACTT ACTCAATGTACTAACGGATCAAACATTAAAAGTGCTTTGTTTGTTTTCTTCGGTTGCTGCGCGAGCGGGCAATATTGGTC AGAGTGATTACGCAATGGCTAATGAAGTACTTAATCGTGTGGCCGCTTGGTATAGCGCAGCAAATAACACTAAAGTAGTG GCTATTAACTGGGGGCCGTGGGAAAGCGGTATGGTAACGGATGCGCTCAAACAGAAGTTTGCGCAAATGGGGGTTGAGCT AATTCCCTTGCACAGCGGTGCACAATTTTTTGTAGATGAGCTACAACACAGCCAAATTAATACCGAGGTCGTTTACGGTG GCATGCCTCTTAATAAACCGTTGGCCAACCCAGGTGCTTTGTGTAGCCATAAAATGCAGGTGGTGGCGAGTTTACAATCT CTGCCCCATTTAGAAAGCCACAAGGTTCGCGGTGAAATAGTACTCCCTGTAGTACAGGTGGTAGATTGGTTTAGGTCTGC CATGCTATCTGTGCTGCCAAGTTTAAAGGCGTTTACACTGTTAGATTTAAAAGTGCTAAAAGGCATTGTACTTAGCGAGC CTCACGTTACTTTTACAATCAACTTGGAAGAACTGCCCAACTCAACGCTCTTTTCGCTTGGTCTTACCGATGCCAATGGT GTACTGCGCTATAGCGCAAACGTTAACTGTTTAGATAAAAGTTATACCGAAGCGAGTGGTGCCGGTGTGGGCGAATCCGG GGAGGCGCCGTCTCGTGGCTTACTTAGCAAGCCAAGCAACCCCAGCTATACGCATTTTAACCCCTATAAAGAATTGTTGT TTCACGGTGAACACTACCAGTCGATTACGCGAATTGGCGCTTTAGAAGATGATAGTGCCGTGGCCGAATTAATAGGTACA AATCAATTAAATTGGGCTGACTATGGTGCAAGTATAGATCAAGCTATATTGGATGGCGCTTTGCAACTTGCATTGGTTTG GGGGCAAAAGCATATCAATCGCGAAAGCCTGCCAATGGGGTTCGACACTATGCAAATAAATCACTTTGGTACAGTACAGG GCGCAGTGCGCTGTTATTTACAGCGTGAAAAACACGATAGTGTGAGCACGGTTTCCAATATTTGGTTATTAGATTCCGCC GATACAGTACTTGCTTGCATACGCGGTTTGCGTATGTACGCTGTTAACGAAAGCTTGCGGTAA
Upstream 100 bases:
>100_bases AAAATGCCTTTGCTGTGGTTCCGCAAAAGCTATAGCACCTAATGCAGTTTGACGTGCCCCTTTAAAAACGAAATTTTTAG CATAGCCATCGAGTTTAAAT
Downstream 100 bases:
>100_bases ATTAGTTATGGCGTATAACCATTTTGAGCCTATCGCTATTGTCGGCGAGGGGTGCGTATTGCCCAGCGTAAATTCTGTAG AGGATTTATGGCGAGTTACA
Product: polyketide synthase module-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>2260_residues MSKSSPIAVVGVSSIFPGSPQVSGFWRDILQGKDQIREIPESYWLIDDYYDKNPQAQDKTYGRRGAFIESVAFDCIEHGI LPSQLQDIDTVQLLALVAAQHVLRDAAKGDYKHLDKSRMSVILGVAGGTEQLVQMGARLQKPVWLKSLREAGIAENLAQE ICQRIADHYVPWSEASFPGLLGNVVAGRIANRLDLGGTNCVVDAACASSCSALAMAVNELHLGHSDFVITGGADALNDIL MYMCFSKTPALSATGDCRPFSDAADGTILGEGVGMLALRRLEDAERDGDTIYAVIKGVGSSSDGAGTAVYAPVSEGQAKA INRAYTQADFSANTIELIEAHGTGTKAGDKAEFNGLNIAFGASEQSQSNNQWCALGSVKSQIGHAKGAAGAAALIKAVMA LHHKVLPPTIKVNQPNPAFNIEQTPFYINTKLRPWVRNSHYPRRAGVSSFGFGGSNFHVALEEYTTAQANPRLHMVSDTH LVLAAGGSHEELFRKLINTVDNLPSDKDALEYFARQSQETVQASQPYRVAFVIDSVEQLRQLIAQAKQQTQANTAKNVNS PSGWFYGVSQGATAGESEHVGYGKIACLFPGQGSQYVDMCAPLATVFPAAREVWDSAESNFAEGESLSRVVFPISTFSEA AAQSQRDWLNQTEWAQPAIGAASLSVWALLKKLGLNPEAFAGHSYGELTALSAAGVLCEQSLIATARARGLAMRDASAST SGAMAAVHASVNTVNELLEKLLSEAKQAGNANPIITLANINSPSQVVISGATEVVDAFTELCEQENIRVSKLPVSTAFHS PIVAQAVASLADHLKTTPFNPIQKTVYANKTAQPYPSDVTQQQQLLTQQLISPVRFQEQIEAMYAQGYRTFIEVGPGNVL TGLVSAILQGKNHVAIATDKKANNSLATFWKALGQLTCLGVKLDFSALWQDFRKQTAPADRVKPKMALPITGINYNRVYP PKNGAAGIPPANPEELLAQSVNAQSTSAQPIKTEQDNLHSINKNDGVLLNTPNAQPHAASSLKSNSVDTSSMVPNPIAAM PTTSSHQAHLQTEDSPISNFTPNQKSEWLAAFENIQKQTNETHRQFLQMSEQALAQLGQLVASGSAAPVDTSSVSAQAEH TIAVNNLDVSAHAQYQQPQSAIQSEPNVAPAGDEIVKTVAEPAAPSAMPLPVTQNLDVAEVMLNVVADKTGYPREMLALS MSLENDLGIDSIKRVEILSATLDVVPNLPEVNPSDMAVLSTLEEVVQFIQRKMAEVAPSSNSMATPQNQVSAPVESPQIP SPAQKVVADINVNDLLMQVVADKTGYPLEMLNLDMHLDADLGIDSIKRVEILSAATEQLDSLPELDNSVMAGLNTLAEIS RYITAQLSAASGVASEAIAQPATHEVSTPSITSSDNTVDIQHIMLSVVAEKTGYPVDMLEPSMDLENDLGIDSIKRVEIL SATLEKVPNLPEFDAASMSSLNTLAEIIEFIKKQLGSTKDETNPSAAVVEKELQAAATNNNLLSRYELELLQLPRPNFMP HQLMQPLVIVPANSPCAQPLCDALKARGLQAEVAQRVNENHKAVISLNGLQKFKHSKDALAINRVIFEQACTLAPVLEKE VGVFIAVQNTSGDYGQSGASGVQSWSGGISGLVKTAAQEWPAALVRSIDINIEKITLAELVNNLAQEIVDGGIQREVALG LYGKRCVPVSVKASVQQGSMPLHKDDVILVTGGARGVTAEAILALSKQLPLKFALLGRSPVIDVSRFEHCADEAAIMRAI LAEAKAAGIQMLPAELKREVGLVVSSREVSKTLSNLQAAGSQVSYFPCDINNQDQLAEVVKQIQTQLGPISGVVHGAGVL ADKLLSGKKIEHFDAVFGTKVQGLHNLLNVLTDQTLKVLCLFSSVAARAGNIGQSDYAMANEVLNRVAAWYSAANNTKVV AINWGPWESGMVTDALKQKFAQMGVELIPLHSGAQFFVDELQHSQINTEVVYGGMPLNKPLANPGALCSHKMQVVASLQS LPHLESHKVRGEIVLPVVQVVDWFRSAMLSVLPSLKAFTLLDLKVLKGIVLSEPHVTFTINLEELPNSTLFSLGLTDANG VLRYSANVNCLDKSYTEASGAGVGESGEAPSRGLLSKPSNPSYTHFNPYKELLFHGEHYQSITRIGALEDDSAVAELIGT NQLNWADYGASIDQAILDGALQLALVWGQKHINRESLPMGFDTMQINHFGTVQGAVRCYLQREKHDSVSTVSNIWLLDSA DTVLACIRGLRMYAVNESLR
Sequences:
NA
Specific function: NA
COG id: COG3321
COG function: function code Q; Polyketide synthase modules and related proteins
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA