Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020036

GI number:

Start: 477227

End: 478987

Strand: Reverse

Name: Not Available

Synonym: Sde_0387

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020037

Following gene: 90020035

Centisome position: NA

GC content: NA

Gene sequence:

>1761_bases
ATGAGCACACCGGCTAAACCCACCTCTGTAGAATCCTATAAACGCTTGCTTAGCTATGCGTTTAAATACAAAGCCTATTT
TATTATTAGCTTTATTGGTTTTGGCGTTTTCGCAGCCATGGAAGCCCAGCTAATTAATATTTTAGAATATTTTGTAGATA
GACTAGAGGGGCGCCCTTCGGCACCGGTATTGGGGTTATCTGCCGATGTCACTTCATCTTTGTGGTTTGTGCCTATCTCG
GTTGTGGTGCTCAGTATTATTCGCGGCATTGGCGCCTACTTCGGTAATTTTTATATGAGCCTTGTAGGCTTAAACGTCAT
TACCAACCTGCGCCGCCAAATTTTTTCGCAAATGATTTATTTGCCACAATCTTTTTACGATACAAAAAATAGCGGCGAGC
TTATATCGCTATTGGTGTACAACATAGAGCAAGTAACGGGGTCGGTAACCAACGCGGTAAAAACCCTGTTTAGAGACGGC
ATGAGCGTAGCTTGGTTTTTAGCAATGATGCTAATTATCAACTGGAAACTCACCCTCGCGTTTATTTGCGTAGCCCCTGT
GTTGGGCGGCCTTATGTATATTGCCAGCAAATACTTCCGCAAAGTTAGCCACAAAATTCAGTCTGCCGTTGGCCGCGTAA
GCCATGTCGCCACCGAAAGTATTCAAGGCATTAAACTGGTAAAAAGTTACGGCGGCGAAAAATACGAACTAGACCGCTTT
AACGATGCCACCAACCAAAACCTGCACTACGGCACCAAGTTCGAACGCGTGTCTGCTTTTCAAACCCCCGTATTACACAT
AGTGCTGGCGCTGGCGCTAGCGGTAACCTTTTATTTAATTATGATTTTATGGGATAGCGACTCATCCAAAGCCGTGGTGT
ACGCCACCTACGCAGCCGCTATAGCCAAACCCTTTAGGCAACTAACCAAAATAAACAGCATTATCCAAAAAGGCCTTGCC
GCTGCCGACACCATTTTTGAAGTGCTCGACCTACAAGCCGAACCCAATAGCGGCCAGCAAAAACTTAACGCACCGAAAGG
CCGAGTAGAATTAAAAGACGTTCACTTTGGTTACAATCAAGATACCCCAGCCCTAAACGGCATAAGCTTTGCCATAGAAC
CTGGCCAAACCGTGGCGCTGGTGGGTAGCTCGGGCAGTGGTAAATCTACCATTGTGAGCTTACTGTTACGCTTTTACGAT
AACCAACAGGGCAGCATTACTATTGATGGCACACCAATTCAATCGCTTGAATTGCACAACCTGCGCGAACACATTGCACT
GGTTAACCAGCAGACCATTTTATTTAACGATACCATTGCCGCGAACATTGCCTACGGCAGCGAACATATAGACGAAGCGC
GCATTCAAGATGCCGCCAAGCAAGCCAACGCGCACGATTTTATTATGGCACTGCCTAACGGCTACCAAACACCCGCCGGT
GAAGATGGCTCACGCCTTTCTGGTGGTCAGCGCCAACGTATAGCTATTGCCCGCGCGCTATACAAAAACGCCCCTATATT
AATTTTAGATGAAGCCACATCGGCGTTAGATAACGAATCGGAAAAACAAATTCAATCGGCATTGGATGAATTAAAACAAG
GGCGTACCACACTGGTTATCGCCCACCGTTTATCCACCATAGAAAACGCCGACACCATTTTAGTAATGGATAACGGCCGC
ATTGTTGAGGCTGGCAACCATCAAACACTACTCGATCGCAGCGGTGTATACGCCAACCTCTACCACTCCCAGTTTTCGTA
A

Upstream 100 bases:

>100_bases
TGCGCCCATCGCGAAGTAAAACACCAAAGGCGGCGCTTGACCGCCTTTTTTATTCCCCCCGCACAATGACTCAAGCCCAT
TTTTACCACATGAGCACACC

Downstream 100 bases:

>100_bases
CCTGTGGTAACTAAGCTTGGCGCAGCCCTAATGCGTCACTCATAATTCACACTAGCAATTCACAACTAGCAATTCACAAC
TAGCAATTAGCGATTGGAAC

Product: lipid A ABC transporter ATP-binding/permease

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>586_residues
MSTPAKPTSVESYKRLLSYAFKYKAYFIISFIGFGVFAAMEAQLINILEYFVDRLEGRPSAPVLGLSADVTSSLWFVPIS
VVVLSIIRGIGAYFGNFYMSLVGLNVITNLRRQIFSQMIYLPQSFYDTKNSGELISLLVYNIEQVTGSVTNAVKTLFRDG
MSVAWFLAMMLIINWKLTLAFICVAPVLGGLMYIASKYFRKVSHKIQSAVGRVSHVATESIQGIKLVKSYGGEKYELDRF
NDATNQNLHYGTKFERVSAFQTPVLHIVLALALAVTFYLIMILWDSDSSKAVVYATYAAAIAKPFRQLTKINSIIQKGLA
AADTIFEVLDLQAEPNSGQQKLNAPKGRVELKDVHFGYNQDTPALNGISFAIEPGQTVALVGSSGSGKSTIVSLLLRFYD
NQQGSITIDGTPIQSLELHNLREHIALVNQQTILFNDTIAANIAYGSEHIDEARIQDAAKQANAHDFIMALPNGYQTPAG
EDGSRLSGGQRQRIAIARALYKNAPILILDEATSALDNESEKQIQSALDELKQGRTTLVIAHRLSTIENADTILVMDNGR
IVEAGNHQTLLDRSGVYANLYHSQFS

Sequences:
NA

Specific function: NA

COG id: COG1132

COG function: function code V; ABC-type multidrug transport system, ATPase and permease components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA