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The map label for this gene is 89885927

Identifier: 89885927

GI number: 89885927

Start: 203307

End: 203903

Strand: Reverse

Name: 89885927

Synonym: Rfer_4441

Alternate gene names: NA

Gene position: 203903-203307 (Counterclockwise)

Preceding gene: 89885928

Following gene: 89885926

Centisome position: 79.2

GC content: 51.42

Gene sequence:

>597_bases
ATGAAAATTGACTTCACCCTCGAGTTGACCCAACTCATGAAATTTTCCGGTGACACGGCAACGGCCATCCGTATGTACAG
CAAATACAGTGGCGGAACGCCTATGAACGGGGGCGAGCGCAGAGACCCAGCAATGGCCCCTGTAGACCTCATGTTTCTGT
CAGATGCAATTACCCAGCTCCTGAATATCGGAGGTGCTATTGAGCGAGGTGATCCGGTAAACATTGCGGAGACTTGCCAT
TCAGTGCAAAGGCTTTTTGAGAGCTACACGACTGACAACCCTAGTTACAGCCCGCAGGCAAAGCCAACCTTTGACTACTG
GGCGGGACAGGTTGATTTGGGTGTTGCTGTGAAGGCCTTGAAGGGGATTAAGGAAAAGGCGGCAATGACAAGTGATGGCG
AAGGCCATATTGCAAGGCTCAAAGAAATTTACGTTGACGTTGATCCCGACACGATTCTGTCCAACACAAACACCCGAATA
TTTCTTCCCGCGCAACATGGGGGTGCCGATTACGCGTCCATGTCGCTAACTGACGCGGAGGTTGAGAAAGTCAAGGTGCC
GGGACGGGAGAAACAGCCTGAGACACCTAATTCATAG

Upstream 100 bases:

>100_bases
GCCTAACCTGTCCACGGTCGAACAAAGTATCGAGACTGCCGGAAGACTGATGGGCCTTTGGGCGACCGAATCAACTTCTG
CAACGTAGAGGAAAACACAG

Downstream 100 bases:

>100_bases
GAAAGCATTATGAAAATCCGCAATTTCTATCCACGGCAAGTTCTTCGCAAACTTCAAGGCGAAAACAAACAATTCGATGC
TGGCCAACTCGCGGCAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKIDFTLELTQLMKFSGDTATAIRMYSKYSGGTPMNGGERRDPAMAPVDLMFLSDAITQLLNIGGAIERGDPVNIAETCH
SVQRLFESYTTDNPSYSPQAKPTFDYWAGQVDLGVAVKALKGIKEKAAMTSDGEGHIARLKEIYVDVDPDTILSNTNTRI
FLPAQHGGADYASMSLTDAEVEKVKVPGREKQPETPNS

Sequences:

>Translated_198_residues
MKIDFTLELTQLMKFSGDTATAIRMYSKYSGGTPMNGGERRDPAMAPVDLMFLSDAITQLLNIGGAIERGDPVNIAETCH
SVQRLFESYTTDNPSYSPQAKPTFDYWAGQVDLGVAVKALKGIKEKAAMTSDGEGHIARLKEIYVDVDPDTILSNTNTRI
FLPAQHGGADYASMSLTDAEVEKVKVPGREKQPETPNS
>Mature_198_residues
MKIDFTLELTQLMKFSGDTATAIRMYSKYSGGTPMNGGERRDPAMAPVDLMFLSDAITQLLNIGGAIERGDPVNIAETCH
SVQRLFESYTTDNPSYSPQAKPTFDYWAGQVDLGVAVKALKGIKEKAAMTSDGEGHIARLKEIYVDVDPDTILSNTNTRI
FLPAQHGGADYASMSLTDAEVEKVKVPGREKQPETPNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21580; Mature: 21580

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDFTLELTQLMKFSGDTATAIRMYSKYSGGTPMNGGERRDPAMAPVDLMFLSDAITQL
CEEEEEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LNIGGAIERGDPVNIAETCHSVQRLFESYTTDNPSYSPQAKPTFDYWAGQVDLGVAVKAL
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEECHHHHHHHH
KGIKEKAAMTSDGEGHIARLKEIYVDVDPDTILSNTNTRIFLPAQHGGADYASMSLTDAE
HHHHHHHHCCCCCCCHHHEEEHHEEECCCHHEECCCCCEEEEECCCCCCCCCEEECCHHH
VEKVKVPGREKQPETPNS
HHEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKIDFTLELTQLMKFSGDTATAIRMYSKYSGGTPMNGGERRDPAMAPVDLMFLSDAITQL
CEEEEEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LNIGGAIERGDPVNIAETCHSVQRLFESYTTDNPSYSPQAKPTFDYWAGQVDLGVAVKAL
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEECHHHHHHHH
KGIKEKAAMTSDGEGHIARLKEIYVDVDPDTILSNTNTRIFLPAQHGGADYASMSLTDAE
HHHHHHHHCCCCCCCHHHEEEHHEEECCCHHEECCCCCEEEEECCCCCCCCCEEECCHHH
VEKVKVPGREKQPETPNS
HHEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA