Definition Rhodoferax ferrireducens T118 plasmid1, complete sequence.
Accession NC_007901
Length 257,447

Click here to switch to the map view.

The map label for this gene is 89885921

Identifier: 89885921

GI number: 89885921

Start: 200359

End: 200598

Strand: Reverse

Name: 89885921

Synonym: Rfer_4435

Alternate gene names: NA

Gene position: 200598-200359 (Counterclockwise)

Preceding gene: 89885922

Following gene: 89885920

Centisome position: 77.92

GC content: 53.33

Gene sequence:

>240_bases
ATGAAGGAAAACGCCATGTCACCACTGCAATCAGAGCCAGAAGCAATATCACGCAGCGAATGGATCGCCGCAGCCAAAAG
GGTCTATTTGGACGCTGGTGATACTGATACCGAAGCGAGTGAGCAGGCTAAGTACCTGTGCAACGAAGAAGACTGGTCTA
GCGGCGAGGTCCAAGACCCAATCGATGCAGCCAAGGAAGACGTTGAAGGTCGGCCACAAGTGAGCCAGGTTGCCGCATAA

Upstream 100 bases:

>100_bases
GGATTTTGGAGGCGGGGCGAAACAGATTCAAACGCCAGAACAGGCTGACAAACTATTCAAGACGTATGGCGAGTCTCCGC
GTTACTCGTAACGAGCACAA

Downstream 100 bases:

>100_bases
ACTCAAGGAAATCAAATGTCCGCAGTAAACACACCCCTCGGGTCCAAGGTTCATTTCGTTTGGGTAGACGGAAAAACGAG
TAGCTTCGTATTTCGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MKENAMSPLQSEPEAISRSEWIAAAKRVYLDAGDTDTEASEQAKYLCNEEDWSSGEVQDPIDAAKEDVEGRPQVSQVAA

Sequences:

>Translated_79_residues
MKENAMSPLQSEPEAISRSEWIAAAKRVYLDAGDTDTEASEQAKYLCNEEDWSSGEVQDPIDAAKEDVEGRPQVSQVAA
>Mature_79_residues
MKENAMSPLQSEPEAISRSEWIAAAKRVYLDAGDTDTEASEQAKYLCNEEDWSSGEVQDPIDAAKEDVEGRPQVSQVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8644; Mature: 8644

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENAMSPLQSEPEAISRSEWIAAAKRVYLDAGDTDTEASEQAKYLCNEEDWSSGEVQDP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCH
IDAAKEDVEGRPQVSQVAA
HHHHHHCCCCCCCCHHHCC
>Mature Secondary Structure
MKENAMSPLQSEPEAISRSEWIAAAKRVYLDAGDTDTEASEQAKYLCNEEDWSSGEVQDP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCH
IDAAKEDVEGRPQVSQVAA
HHHHHHCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA