| Definition | Rhodoferax ferrireducens T118 plasmid1, complete sequence. |
|---|---|
| Accession | NC_007901 |
| Length | 257,447 |
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The map label for this gene is 89885913
Identifier: 89885913
GI number: 89885913
Start: 191825
End: 192187
Strand: Reverse
Name: 89885913
Synonym: Rfer_4427
Alternate gene names: NA
Gene position: 192187-191825 (Counterclockwise)
Preceding gene: 89885914
Following gene: 89885912
Centisome position: 74.65
GC content: 47.38
Gene sequence:
>363_bases ATGTCAAACCCGAAATTTGCCGCAGTTGCTACCGACATTGTTTGCGCCGCACGAGCTGTGACCAAAAAACAGAAGCATTA CCCGCTTGCAATCGAGGCAATCGGGACAGATGTTGACCCTTATCATATTTACTTTTTGTTGAGCCGTGGCCACCATGATG TCCATGAATTCATGAAGAAGGTGCGCGAGGAAGGCTACGGCTTTCCGCTTGAGATGCCCATACACCTTTGGTTCAGACTT TGTCCAAATGGATCGAGTGGGTTCAAAAGCATTTACGTCAATGCCAGCCAAGGCGAACGTGGCTCATTCCCTGTCACCAG ATCCTCCTTTGTTTTTAAAAAAAAGACACATACGAGCAACTGA
Upstream 100 bases:
>100_bases GATTCTGAGTGCTTGGTTAATCAGCGCGTTGGTTTGCTCTACTTTTGGTGTTTTTTGCGGCTGGCGAGTGTATTGCCAAG TCCAAGCATAGGAAATCGGC
Downstream 100 bases:
>100_bases ACGCTGCAAACTGAAGGAAATCATGGACGATCTCTGCCCCGATGACGCTTCAGTGCATCAAGAGTCTTTGAGACTGCTCG CAGAAGCTGCTGAGTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSNPKFAAVATDIVCAARAVTKKQKHYPLAIEAIGTDVDPYHIYFLLSRGHHDVHEFMKKVREEGYGFPLEMPIHLWFRL CPNGSSGFKSIYVNASQGERGSFPVTRSSFVFKKKTHTSN
Sequences:
>Translated_120_residues MSNPKFAAVATDIVCAARAVTKKQKHYPLAIEAIGTDVDPYHIYFLLSRGHHDVHEFMKKVREEGYGFPLEMPIHLWFRL CPNGSSGFKSIYVNASQGERGSFPVTRSSFVFKKKTHTSN >Mature_119_residues SNPKFAAVATDIVCAARAVTKKQKHYPLAIEAIGTDVDPYHIYFLLSRGHHDVHEFMKKVREEGYGFPLEMPIHLWFRLC PNGSSGFKSIYVNASQGERGSFPVTRSSFVFKKKTHTSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13575; Mature: 13443
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPKFAAVATDIVCAARAVTKKQKHYPLAIEAIGTDVDPYHIYFLLSRGHHDVHEFMKK CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHH VREEGYGFPLEMPIHLWFRLCPNGSSGFKSIYVNASQGERGSFPVTRSSFVFKKKTHTSN HHHCCCCCCEECHHEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure SNPKFAAVATDIVCAARAVTKKQKHYPLAIEAIGTDVDPYHIYFLLSRGHHDVHEFMKK CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHH VREEGYGFPLEMPIHLWFRLCPNGSSGFKSIYVNASQGERGSFPVTRSSFVFKKKTHTSN HHHCCCCCCEECHHEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA