Click here to switch to the map view.

The map label for this gene is 89885904

Identifier: 89885904

GI number: 89885904

Start: 184685

End: 184936

Strand: Reverse

Name: 89885904

Synonym: Rfer_4418

Alternate gene names: NA

Gene position: 184936-184685 (Counterclockwise)

Preceding gene: 89885905

Following gene: 89885903

Centisome position: 71.83

GC content: 52.78

Gene sequence:

>252_bases
TTGCACGCGCAGCAATCAATAAAATCCACAATCCATAGGAAAACCGCCATGAGAGAGCAAATCATTCAACGTGTTGCAGT
ACTTTGCGAGCGGCAGCAGCAGGAGAAGGCACGCAGCGTTCAGATGTTCGGGGGGTTCGGCCCCGAAGTCGCCGTTCCAC
CAGACATTACTTTACTCAATGACGAAAGCCTTCTGGCGCTACTGGAAGAGTTGGTGACGCAGTGGGTTTGCCGAAATTCA
GCGGTCGTCTGA

Upstream 100 bases:

>100_bases
AACGAGGGATTTTTCTGGTATCTGGTTGTCTTGCCAGCCTTGGCCTCATGGTTTGTGGGGTGCGTTGTACAAGCCTTCAA
GTATGTAGTCATGCGTAGCA

Downstream 100 bases:

>100_bases
CAGATAAGAAAAAAGTTATCAAGGAAACAATCGTGTCGAGTTCGAAGAAGCAGAATGTTGTCCAGGCAGAGGCGGTCTGG
GAGGAGTTTGATAACGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MHAQQSIKSTIHRKTAMREQIIQRVAVLCERQQQEKARSVQMFGGFGPEVAVPPDITLLNDESLLALLEELVTQWVCRNS
AVV

Sequences:

>Translated_83_residues
MHAQQSIKSTIHRKTAMREQIIQRVAVLCERQQQEKARSVQMFGGFGPEVAVPPDITLLNDESLLALLEELVTQWVCRNS
AVV
>Mature_83_residues
MHAQQSIKSTIHRKTAMREQIIQRVAVLCERQQQEKARSVQMFGGFGPEVAVPPDITLLNDESLLALLEELVTQWVCRNS
AVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9373; Mature: 9373

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAQQSIKSTIHRKTAMREQIIQRVAVLCERQQQEKARSVQMFGGFGPEVAVPPDITLLN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
DESLLALLEELVTQWVCRNSAVV
CHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHAQQSIKSTIHRKTAMREQIIQRVAVLCERQQQEKARSVQMFGGFGPEVAVPPDITLLN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
DESLLALLEELVTQWVCRNSAVV
CHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA