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The map label for this gene is nab2

Identifier: 89898790

GI number: 89898790

Start: 1133981

End: 1134217

Strand: Direct

Name: nab2

Synonym: CF0983

Alternate gene names: NA

Gene position: 1133981-1134217 (Clockwise)

Preceding gene: 89898789

Following gene: 89898791

Centisome position: 97.23

GC content: 36.29

Gene sequence:

>237_bases
ATGAAAGACTTTTTAGCTTATATTATTAAAAACCTTGTGGATCGCCCAGAGGAAGTGCACATTAAAGAAGTTCAAGGCAC
TCACACCATTATTTACGAATTAACAGTTGCGAAACCCGATATTGGTAAAATTATAGGAAAAGAGGGTCGTACAATCAAAT
CCATCCGCACTCTTCTTATTTCTGTAGCCAGCAGAAATAACGTGAAGGTTAGCTTAGAAATTATGGAAGATAAGTAG

Upstream 100 bases:

>100_bases
TTGATTATTTTAACAGACGATTTAAAATTAAATTAATCTGAGTTCGATTTTTTTTACCGTTCTCCCGCAGACAACGCGAA
TTTAGTTATAGGATTACTTT

Downstream 100 bases:

>100_bases
CTTTAAAATATTTTCCCCTATACGTCTTTTCCAGAATATTTCATCACACTCGATATTCTGTTTCCGCCTGCGGAAGCCCC
GCAGGCAAAGAAGAATAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKDFLAYIIKNLVDRPEEVHIKEVQGTHTIIYELTVAKPDIGKIIGKEGRTIKSIRTLLISVASRNNVKVSLEIMEDK

Sequences:

>Translated_78_residues
MKDFLAYIIKNLVDRPEEVHIKEVQGTHTIIYELTVAKPDIGKIIGKEGRTIKSIRTLLISVASRNNVKVSLEIMEDK
>Mature_78_residues
MKDFLAYIIKNLVDRPEEVHIKEVQGTHTIIYELTVAKPDIGKIIGKEGRTIKSIRTLLISVASRNNVKVSLEIMEDK

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 8862; Mature: 8862

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFLAYIIKNLVDRPEEVHIKEVQGTHTIIYELTVAKPDIGKIIGKEGRTIKSIRTLLI
CHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCHHHHHCCCCCHHHHHHHHHH
SVASRNNVKVSLEIMEDK
HHCCCCCEEEEEEEECCC
>Mature Secondary Structure
MKDFLAYIIKNLVDRPEEVHIKEVQGTHTIIYELTVAKPDIGKIIGKEGRTIKSIRTLLI
CHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCHHHHHCCCCCHHHHHHHHHH
SVASRNNVKVSLEIMEDK
HHCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12682364 [H]