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The map label for this gene is xcd

Identifier: 89898757

GI number: 89898757

Start: 1096169

End: 1096957

Strand: Direct

Name: xcd

Synonym: CF0950

Alternate gene names: NA

Gene position: 1096169-1096957 (Clockwise)

Preceding gene: 89898756

Following gene: 89898764

Centisome position: 93.99

GC content: 39.92

Gene sequence:

>789_bases
ATGCTTATTGTTTTAGCCTTTCGCCAAGTCTTCTTTTCTAAACAACCCGACCATTTAGAAAGATTACAGAGATATTTGTT
GCTTCTTAAACAATCCTACCCGTTAGTGCTCCCCGGAGAACCAGTCAAAAAGCTATCTCTCATGATAACATTTGATCATG
CTTCCGCGGACTTCTACTCTCATGTTTTCCCTTTTCTAAAAGCTCATAATATTCCTGCTGTTGTTGGGATAGCCTGGAGA
TATGTTGCTGATACGTCTGCTCTTTCCCTCCCTCTTGCACACCGTCTCGCTCCTAGCGAGACTTTAGCTTTCCAGGATGA
AGTATTTGCCTATCATCAACCATTTTGCTCTCAACAAGAGCTGAAAACCCTTGCAGAGACTCCTTGTATACAATTAGCCT
CGTCAGGATTTGCTATTCGCAATTTGCAATATTCTCCTCCCTATCTCGCAACAGAAATCTTTTTATCCAAATATTCTATA
GAGAAAGCCCTAGGAAAAAAGCCCTTAGGCTTTTTCTATCCTTTTGGAAAATATGATCATGTGTGTGAACGGGTAGTTAA
GAAATACTACCCCTTTTCTTTTGTTTTGGGAGATACGATAAATAGGAAAAATAAACAGCATGGGATTTATCGCTTAGATA
TGACACGAGCGGCCTATGTCTTGCCGAAATTTATCCTCAGCCCACAATATATTAAAAACTGGCTAATGGATAGGTGTAGA
CAAACATATCTACGCTGGCGTCCATACTCTCGAGAACGTATCAATTTTCAAGAAAGCTCGTCTAAATAA

Upstream 100 bases:

>100_bases
GCACCAGCTCCTTCTCCCCAACAGCCTCCGAAACTTCTCTCTGGATCTTTAGTCATATATCCTTATGAGGAAAACACCCC
CCCCATCTTAAGGCAAGCGC

Downstream 100 bases:

>100_bases
AGATTACACTCGCACTCTATCTAATATAACACGAAAAGCCGACAGAAACGTATCAATGTCTTCCTTATCGTTGTATATTC
CTAAAGACACTCTAAGAACA

Product: xylanase/chitin deacetilase

Products: NA

Alternate protein names: Xylanase/Chitin Deacetilase

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLIVLAFRQVFFSKQPDHLERLQRYLLLLKQSYPLVLPGEPVKKLSLMITFDHASADFYSHVFPFLKAHNIPAVVGIAWR
YVADTSALSLPLAHRLAPSETLAFQDEVFAYHQPFCSQQELKTLAETPCIQLASSGFAIRNLQYSPPYLATEIFLSKYSI
EKALGKKPLGFFYPFGKYDHVCERVVKKYYPFSFVLGDTINRKNKQHGIYRLDMTRAAYVLPKFILSPQYIKNWLMDRCR
QTYLRWRPYSRERINFQESSSK

Sequences:

>Translated_262_residues
MLIVLAFRQVFFSKQPDHLERLQRYLLLLKQSYPLVLPGEPVKKLSLMITFDHASADFYSHVFPFLKAHNIPAVVGIAWR
YVADTSALSLPLAHRLAPSETLAFQDEVFAYHQPFCSQQELKTLAETPCIQLASSGFAIRNLQYSPPYLATEIFLSKYSI
EKALGKKPLGFFYPFGKYDHVCERVVKKYYPFSFVLGDTINRKNKQHGIYRLDMTRAAYVLPKFILSPQYIKNWLMDRCR
QTYLRWRPYSRERINFQESSSK
>Mature_262_residues
MLIVLAFRQVFFSKQPDHLERLQRYLLLLKQSYPLVLPGEPVKKLSLMITFDHASADFYSHVFPFLKAHNIPAVVGIAWR
YVADTSALSLPLAHRLAPSETLAFQDEVFAYHQPFCSQQELKTLAETPCIQLASSGFAIRNLQYSPPYLATEIFLSKYSI
EKALGKKPLGFFYPFGKYDHVCERVVKKYYPFSFVLGDTINRKNKQHGIYRLDMTRAAYVLPKFILSPQYIKNWLMDRCR
QTYLRWRPYSRERINFQESSSK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30609; Mature: 30609

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVLAFRQVFFSKQPDHLERLQRYLLLLKQSYPLVLPGEPVKKLSLMITFDHASADFYS
CEEEEEHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHEEEEEEEEECCCHHHHH
HVFPFLKAHNIPAVVGIAWRYVADTSALSLPLAHRLAPSETLAFQDEVFAYHQPFCSQQE
HHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
LKTLAETPCIQLASSGFAIRNLQYSPPYLATEIFLSKYSIEKALGKKPLGFFYPFGKYDH
HHHHHHCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHH
VCERVVKKYYPFSFVLGDTINRKNKQHGIYRLDMTRAAYVLPKFILSPQYIKNWLMDRCR
HHHHHHHHHCCEEEEECCHHCCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHH
QTYLRWRPYSRERINFQESSSK
HHHHHCCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MLIVLAFRQVFFSKQPDHLERLQRYLLLLKQSYPLVLPGEPVKKLSLMITFDHASADFYS
CEEEEEHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHEEEEEEEEECCCHHHHH
HVFPFLKAHNIPAVVGIAWRYVADTSALSLPLAHRLAPSETLAFQDEVFAYHQPFCSQQE
HHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
LKTLAETPCIQLASSGFAIRNLQYSPPYLATEIFLSKYSIEKALGKKPLGFFYPFGKYDH
HHHHHHCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHH
VCERVVKKYYPFSFVLGDTINRKNKQHGIYRLDMTRAAYVLPKFILSPQYIKNWLMDRCR
HHHHHHHHHCCEEEEECCHHCCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHH
QTYLRWRPYSRERINFQESSSK
HHHHHCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA