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The map label for this gene is swiB

Identifier: 89898650

GI number: 89898650

Start: 993582

End: 993845

Strand: Direct

Name: swiB

Synonym: CF0843

Alternate gene names: NA

Gene position: 993582-993845 (Clockwise)

Preceding gene: 89898649

Following gene: 89898651

Centisome position: 85.2

GC content: 37.5

Gene sequence:

>264_bases
ATGAGTCAAAAAAACAAAAACTCTGCTTTTATGAACCCCGTCAATGTTTCTGCTGATTTAGAAGCTATCGTTGGCAAAGG
GCCCATGCCCCGCACCGAAATTGTAAAAAAAGTATGGGAACATATAAAAAAACATAATCTACAAGACCCTAAGAATAAAA
GAAATATTCTCCCTGACGATGCCCTAGCTAAAGTCTTTGGTTCCAAGAACCCTATCGATATGTTTCAAATGACAAAAGCT
CTCTCCTCCCATATCGTAAAATAA

Upstream 100 bases:

>100_bases
ATTCTGTTTTTTTGTTTTGACGAGAAACCTTCTCGAAAGATAAAAAAGTTGCGATGAAGAGCTTGTGTCTCTTCGTACCA
CCTTTACTAGGAGTAACCGA

Downstream 100 bases:

>100_bases
AATTAAGAGTTGGCTCTTTTTCAAGATCCTCGTCCTCAAGGGCGAGGAGAAAATGTATTTATAGTGTTTTTGTGGTTATT
GCTTCTCTATCTTTAGCTAC

Product: swiB complex protein

Products: NA

Alternate protein names: SWIB/MDM2 Domain Protein; Fused DNA poisomerase I/SWI Domain-Containing Protein; DNA poisomerase III; SwiB Complex Protein; SWIB Complex; SWIB/MDM2 Domain Superfamily; DNA poisomerase Domain-Containing Protein; DNA poisomerase I; SWIB Complex Protein

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MSQKNKNSAFMNPVNVSADLEAIVGKGPMPRTEIVKKVWEHIKKHNLQDPKNKRNILPDDALAKVFGSKNPIDMFQMTKA
LSSHIVK

Sequences:

>Translated_87_residues
MSQKNKNSAFMNPVNVSADLEAIVGKGPMPRTEIVKKVWEHIKKHNLQDPKNKRNILPDDALAKVFGSKNPIDMFQMTKA
LSSHIVK
>Mature_86_residues
SQKNKNSAFMNPVNVSADLEAIVGKGPMPRTEIVKKVWEHIKKHNLQDPKNKRNILPDDALAKVFGSKNPIDMFQMTKAL
SSHIVK

Specific function: Unknown

COG id: COG5531

COG function: function code B; SWIB-domain-containing proteins implicated in chromatin remodeling

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323889, Length=81, Percent_Identity=40.7407407407407, Blast_Score=74, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6324869, Length=74, Percent_Identity=40.5405405405405, Blast_Score=69, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21357829, Length=81, Percent_Identity=40.7407407407407, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9796; Mature: 9664

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKNKNSAFMNPVNVSADLEAIVGKGPMPRTEIVKKVWEHIKKHNLQDPKNKRNILPDD
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
ALAKVFGSKNPIDMFQMTKALSSHIVK
HHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQKNKNSAFMNPVNVSADLEAIVGKGPMPRTEIVKKVWEHIKKHNLQDPKNKRNILPDD
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
ALAKVFGSKNPIDMFQMTKALSSHIVK
HHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA