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The map label for this gene is pmp19 [H]

Identifier: 89898608

GI number: 89898608

Start: 941361

End: 944174

Strand: Direct

Name: pmp19 [H]

Synonym: CF0801

Alternate gene names: 89898608

Gene position: 941361-944174 (Clockwise)

Preceding gene: 89898607

Following gene: 89898609

Centisome position: 80.72

GC content: 40.33

Gene sequence:

>2814_bases
ATGAAGCAGATGTTTTTTTGGAAATTCGTAATTCTTTCTTCCCTCACACAATTAGCACGAGTTTCTTACTTATCAGGAGC
AGAAATTATTCTTCCCCTATCAGGGATACACACCGGTGAAGATCCTGAGTTATTTACCATGTTAACAACATCTCCTTCAG
GAACTAGCTACACCTTACGTGGTGAATTTACTCTTAAAGATTTTTCTGGTAATAGCATTCACAAATCCGGAGGAGCCTTT
CGCAATTTAGAAGGGAATCTAACATTTATAGGGACTACTCCCCTAGCAACATTAAATTTCACGAATTTACAACTGGGAGC
TCAAGGAGCTGGAGTTTTTTCTAAGTCGTTACTTACCTTTGAAAATCTCAAAGCCCTCAATGTAGAAAACAATCAAAGCG
CTGGGGGAATTATTACCTCCAGTCAAGATATGTTTTTCACTAAAAATGTACATCTTCTCTTCCATAACAATATAAGTTGT
GGCGCCGGAGGAGCTATTCTCCTTGCGGGAACACATCCAAATCGCATGGTTTTCAGAGAACAGCGTGGTATGATTTCTTT
TATTAAGAATCATGCAAAAGTTGTAGAAAATATCACAAATTCTGGAAACGGTGGTGCTATCAGCAGCGAGGTTGCCGGAT
CTTCTATCCTCTTTGATGGAAATCAGGAAATTCTATTTCAAGAAAACCACGCACAATCTGGTGGAGGAATTCACAATGCC
CAAGGCACTGTAGAATTCAGTAAGAATAGAAACACAATTACGTTTATCGAAAATAAAGCCTCAGAATCCGGAGGTGCTAT
TTACGCAAGTCTCTGCAATATAAATAAACAAGCAGCTCCTGTGGTCTTCTATAAAAATAGTGCTCGTCATCTCGGTGGTG
CTGTGTACTCTCAGCAGATGATCTTAAAAAATAATGACGAATCTATTCTCTTTAGCCAAAACTTTGCAGAAGGCGGCGGT
GCTATAGCTTCCACAAGTTGCAACCTTACTGCCTCCCATCCGATTACATTTTCTGAAAACACCTCGGGAAATTTAGGAGG
TGGGGCTATTTACTTAAGTGGTCCAAAACCCAAACTATACCTACACGCACAGAATGCTGACATTGTATTTGTTGGGAACC
TTGCCCATATCGTTACGAAGCACGTTTCAACTACAAATAATAATGCGATTACCATTAAAGGTGCTCCCGAACTCATTCGG
CTTATAGCCAATGAAAACCATTCGATTATTTTTTATGACCCCGTTCTTGCAACGGCACAAAGTACCAACCCCATAAACAT
CAACTCTATTGATAATATTTTTCATTGTGGGTCGGTTATCTTCTCCGGAGAAAAAATTGAGATAAATCGCCAAGATAAAA
GCAATATGACTTCTATCTGTAACCAACCCGTGTATCTAAACAACGGGACTCTTTCCATTACAAGTGGAGCCATTCTTGCC
GTCCAAGAATTCCAACAATTAGGTGGTGTATTAAATCTTAGCCCAGGGTCTATGTTAACAAGTTATAACAGCACCGGCCA
AGATATGATCATTTCTAATCTCAGCTTTGGTTTAGATGCCGCCCGCTCCCATCTACCTGCCGAGATATGTGCAACAGGGA
ATTCAGAAATCAAGTTATCAGGATCCCCGCAAATTCATGATCCCGATAACATATTCTATGATAATCATAATTTGGCATCC
CAGCCCTATCGGATGGAAATCATTTTCAAGTCTGATAAAAATATTAACACTGAAGAATTTGTTCCTGAAGAGATTGCTGT
ACACCAAAATACCCACGGCTATCAAGGCGTGTGGAAATTTCACTGGTCTGGGGAAGAATCAAAAAAGCGTAAAGTATTAA
GAGCTTTATGGATTCCTACGGGAACATTCATTTTAAATCCTGAGAAAGAAGGTCACTTAGTTCCATCTTCTGTCTGGACA
ACGTTTGCGGGAATGCGCTCTTCCAATGACGCTATTCTTGATAACTACTTAAATAACAACACACTGCTTCCTATAAAGCA
CATGTGTATTTTTGGTGGTGTCGTTTCTAGCGTTATGGAACAAACATCCGATAACCCCAACAATTTTTCTTCCACACAGG
CGGGTCATAATCTTGGGATGAAACTTCCCCTCTCATCGAACACTGTTGTTTGTGCTACATTCACTCAACTTCATGGATCT
AGCTCTCAGGATAATATTCCAGGGAAAAGCCATTCTCATATGCTGTTAGGAACCGTAGCTGCTTTTAAAAACTGGAGAGC
TTTATCCCTTAGATCTTCTATAAGTTATGCTGAAGAATCTCATGTGATGAAACATCAGTTTTCTAAGAAGGACATCACTC
GAGGATCTTGGAAAAACCAAGGATTCCGAAGTACTGTGGGATTATCGTATGCTTACCCCAAGGGAATTCGCTGTCTTAAA
ATTACTCCTTTTGTAGATCTTGAATATACCGTAGTTAACCAAAATCCTTTCATAGAAACAGGATATGATCCTCGGTATTT
TGCTTCTTCGCGTTTAAGTAATCTCGCTCTTCCTACAGGAGTCTCCCTAGAACTGCGCTGCTTCGGAGCCAAATACTCCC
TCTTCACGCAATTTAGCATGGCCTATATCAAGGACCTCCACAGGGAGAATCCTGAAACCACAGCTTCATTAATCCTAAAT
CAACATTCTTGGAAAGTTGCGGGAGTCTTTATGGGACAAGAAGCTATGAACTTAAAGTTCCGAGCAACTCTTAAATACAG
ATTAGCCACCGCCTATCTAGGAATCTCAACAATACAACGCGAAGGCAACAATCTTTCCGGAGATGCTTTTGGTGGTTTAT
CTCTGAGTTTCTAG

Upstream 100 bases:

>100_bases
ATGCATTTAGATAAACTTTTTATTTCCATGTATTTATTTTATCCTTCTATGTAAGTTAGGTCTTTTATTCTCGACTGTGA
AACGACTAGGATTCTGAAAC

Downstream 100 bases:

>100_bases
CTTTTCCTTGACTGGGAAATTTGCCAACGATTATGGATAACTTTCGTTAAGATATTAGAGGTGGGTTCCCATCTCCCCAA
AGCTCATCTCTAATATCTTG

Product: polymorphic outer membrane protein A family

Products: NA

Alternate protein names: Polymorphic membrane protein 19 [H]

Number of amino acids: Translated: 937; Mature: 937

Protein sequence:

>937_residues
MKQMFFWKFVILSSLTQLARVSYLSGAEIILPLSGIHTGEDPELFTMLTTSPSGTSYTLRGEFTLKDFSGNSIHKSGGAF
RNLEGNLTFIGTTPLATLNFTNLQLGAQGAGVFSKSLLTFENLKALNVENNQSAGGIITSSQDMFFTKNVHLLFHNNISC
GAGGAILLAGTHPNRMVFREQRGMISFIKNHAKVVENITNSGNGGAISSEVAGSSILFDGNQEILFQENHAQSGGGIHNA
QGTVEFSKNRNTITFIENKASESGGAIYASLCNINKQAAPVVFYKNSARHLGGAVYSQQMILKNNDESILFSQNFAEGGG
AIASTSCNLTASHPITFSENTSGNLGGGAIYLSGPKPKLYLHAQNADIVFVGNLAHIVTKHVSTTNNNAITIKGAPELIR
LIANENHSIIFYDPVLATAQSTNPININSIDNIFHCGSVIFSGEKIEINRQDKSNMTSICNQPVYLNNGTLSITSGAILA
VQEFQQLGGVLNLSPGSMLTSYNSTGQDMIISNLSFGLDAARSHLPAEICATGNSEIKLSGSPQIHDPDNIFYDNHNLAS
QPYRMEIIFKSDKNINTEEFVPEEIAVHQNTHGYQGVWKFHWSGEESKKRKVLRALWIPTGTFILNPEKEGHLVPSSVWT
TFAGMRSSNDAILDNYLNNNTLLPIKHMCIFGGVVSSVMEQTSDNPNNFSSTQAGHNLGMKLPLSSNTVVCATFTQLHGS
SSQDNIPGKSHSHMLLGTVAAFKNWRALSLRSSISYAEESHVMKHQFSKKDITRGSWKNQGFRSTVGLSYAYPKGIRCLK
ITPFVDLEYTVVNQNPFIETGYDPRYFASSRLSNLALPTGVSLELRCFGAKYSLFTQFSMAYIKDLHRENPETTASLILN
QHSWKVAGVFMGQEAMNLKFRATLKYRLATAYLGISTIQREGNNLSGDAFGGLSLSF

Sequences:

>Translated_937_residues
MKQMFFWKFVILSSLTQLARVSYLSGAEIILPLSGIHTGEDPELFTMLTTSPSGTSYTLRGEFTLKDFSGNSIHKSGGAF
RNLEGNLTFIGTTPLATLNFTNLQLGAQGAGVFSKSLLTFENLKALNVENNQSAGGIITSSQDMFFTKNVHLLFHNNISC
GAGGAILLAGTHPNRMVFREQRGMISFIKNHAKVVENITNSGNGGAISSEVAGSSILFDGNQEILFQENHAQSGGGIHNA
QGTVEFSKNRNTITFIENKASESGGAIYASLCNINKQAAPVVFYKNSARHLGGAVYSQQMILKNNDESILFSQNFAEGGG
AIASTSCNLTASHPITFSENTSGNLGGGAIYLSGPKPKLYLHAQNADIVFVGNLAHIVTKHVSTTNNNAITIKGAPELIR
LIANENHSIIFYDPVLATAQSTNPININSIDNIFHCGSVIFSGEKIEINRQDKSNMTSICNQPVYLNNGTLSITSGAILA
VQEFQQLGGVLNLSPGSMLTSYNSTGQDMIISNLSFGLDAARSHLPAEICATGNSEIKLSGSPQIHDPDNIFYDNHNLAS
QPYRMEIIFKSDKNINTEEFVPEEIAVHQNTHGYQGVWKFHWSGEESKKRKVLRALWIPTGTFILNPEKEGHLVPSSVWT
TFAGMRSSNDAILDNYLNNNTLLPIKHMCIFGGVVSSVMEQTSDNPNNFSSTQAGHNLGMKLPLSSNTVVCATFTQLHGS
SSQDNIPGKSHSHMLLGTVAAFKNWRALSLRSSISYAEESHVMKHQFSKKDITRGSWKNQGFRSTVGLSYAYPKGIRCLK
ITPFVDLEYTVVNQNPFIETGYDPRYFASSRLSNLALPTGVSLELRCFGAKYSLFTQFSMAYIKDLHRENPETTASLILN
QHSWKVAGVFMGQEAMNLKFRATLKYRLATAYLGISTIQREGNNLSGDAFGGLSLSF
>Mature_937_residues
MKQMFFWKFVILSSLTQLARVSYLSGAEIILPLSGIHTGEDPELFTMLTTSPSGTSYTLRGEFTLKDFSGNSIHKSGGAF
RNLEGNLTFIGTTPLATLNFTNLQLGAQGAGVFSKSLLTFENLKALNVENNQSAGGIITSSQDMFFTKNVHLLFHNNISC
GAGGAILLAGTHPNRMVFREQRGMISFIKNHAKVVENITNSGNGGAISSEVAGSSILFDGNQEILFQENHAQSGGGIHNA
QGTVEFSKNRNTITFIENKASESGGAIYASLCNINKQAAPVVFYKNSARHLGGAVYSQQMILKNNDESILFSQNFAEGGG
AIASTSCNLTASHPITFSENTSGNLGGGAIYLSGPKPKLYLHAQNADIVFVGNLAHIVTKHVSTTNNNAITIKGAPELIR
LIANENHSIIFYDPVLATAQSTNPININSIDNIFHCGSVIFSGEKIEINRQDKSNMTSICNQPVYLNNGTLSITSGAILA
VQEFQQLGGVLNLSPGSMLTSYNSTGQDMIISNLSFGLDAARSHLPAEICATGNSEIKLSGSPQIHDPDNIFYDNHNLAS
QPYRMEIIFKSDKNINTEEFVPEEIAVHQNTHGYQGVWKFHWSGEESKKRKVLRALWIPTGTFILNPEKEGHLVPSSVWT
TFAGMRSSNDAILDNYLNNNTLLPIKHMCIFGGVVSSVMEQTSDNPNNFSSTQAGHNLGMKLPLSSNTVVCATFTQLHGS
SSQDNIPGKSHSHMLLGTVAAFKNWRALSLRSSISYAEESHVMKHQFSKKDITRGSWKNQGFRSTVGLSYAYPKGIRCLK
ITPFVDLEYTVVNQNPFIETGYDPRYFASSRLSNLALPTGVSLELRCFGAKYSLFTQFSMAYIKDLHRENPETTASLILN
QHSWKVAGVFMGQEAMNLKFRATLKYRLATAYLGISTIQREGNNLSGDAFGGLSLSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 102096; Mature: 102096

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQMFFWKFVILSSLTQLARVSYLSGAEIILPLSGIHTGEDPELFTMLTTSPSGTSYTLR
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEE
GEFTLKDFSGNSIHKSGGAFRNLEGNLTFIGTTPLATLNFTNLQLGAQGAGVFSKSLLTF
EEEEEEECCCCCEECCCCCEEECCCCEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHH
ENLKALNVENNQSAGGIITSSQDMFFTKNVHLLFHNNISCGAGGAILLAGTHPNRMVFRE
CCCEEEECCCCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEHH
QRGMISFIKNHAKVVENITNSGNGGAISSEVAGSSILFDGNQEILFQENHAQSGGGIHNA
HCCHHHHHHHHHHHHHHHCCCCCCCEEEHHCCCCEEEEECCCEEEEEECCCCCCCCEECC
QGTVEFSKNRNTITFIENKASESGGAIYASLCNINKQAAPVVFYKNSARHLGGAVYSQQM
CCEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEECCCCCHHCCHHHHCEE
ILKNNDESILFSQNFAEGGGAIASTSCNLTASHPITFSENTSGNLGGGAIYLSGPKPKLY
EEECCCCEEEEECCCCCCCCEEEECCCCEEECCCEEECCCCCCCCCCEEEEECCCCCEEE
LHAQNADIVFVGNLAHIVTKHVSTTNNNAITIKGAPELIRLIANENHSIIFYDPVLATAQ
EEECCCCEEEECCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCEEEECCCEEECC
STNPININSIDNIFHCGSVIFSGEKIEINRQDKSNMTSICNQPVYLNNGTLSITSGAILA
CCCCEECCCCHHHHHCCCEEECCCEEEECCCCCCCHHHHHCCCEEEECCEEEEECCEEEE
VQEFQQLGGVLNLSPGSMLTSYNSTGQDMIISNLSFGLDAARSHLPAEICATGNSEIKLS
HHHHHHHCCEEEECCCCEEEECCCCCCEEEEECCCCCHHHHHHCCCEEEEECCCCEEEEC
GSPQIHDPDNIFYDNHNLASQPYRMEIIFKSDKNINTEEFVPEEIAVHQNTHGYQGVWKF
CCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCHHHCCCCHHEEECCCCCCCCEEEE
HWSGEESKKRKVLRALWIPTGTFILNPEKEGHLVPSSVWTTFAGMRSSNDAILDNYLNNN
EECCCHHHHHHHHHHEECCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCC
TLLPIKHMCIFGGVVSSVMEQTSDNPNNFSSTQAGHNLGMKLPLSSNTVVCATFTQLHGS
EEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCC
SSQDNIPGKSHSHMLLGTVAAFKNWRALSLRSSISYAEESHVMKHQFSKKDITRGSWKNQ
CCCCCCCCCCCCEEEEEEHHHHCCCEEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
GFRSTVGLSYAYPKGIRCLKITPFVDLEYTVVNQNPFIETGYDPRYFASSRLSNLALPTG
CCCEECCEEECCCCCCEEEEECCEEEEEEEEECCCCCEECCCCCCHHHHHHHCCCCCCCC
VSLELRCFGAKYSLFTQFSMAYIKDLHRENPETTASLILNQHSWKVAGVFMGQEAMNLKF
CEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEHEEEECCCCEEEEEEECCHHHCEEE
RATLKYRLATAYLGISTIQREGNNLSGDAFGGLSLSF
EEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MKQMFFWKFVILSSLTQLARVSYLSGAEIILPLSGIHTGEDPELFTMLTTSPSGTSYTLR
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEE
GEFTLKDFSGNSIHKSGGAFRNLEGNLTFIGTTPLATLNFTNLQLGAQGAGVFSKSLLTF
EEEEEEECCCCCEECCCCCEEECCCCEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHH
ENLKALNVENNQSAGGIITSSQDMFFTKNVHLLFHNNISCGAGGAILLAGTHPNRMVFRE
CCCEEEECCCCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEHH
QRGMISFIKNHAKVVENITNSGNGGAISSEVAGSSILFDGNQEILFQENHAQSGGGIHNA
HCCHHHHHHHHHHHHHHHCCCCCCCEEEHHCCCCEEEEECCCEEEEEECCCCCCCCEECC
QGTVEFSKNRNTITFIENKASESGGAIYASLCNINKQAAPVVFYKNSARHLGGAVYSQQM
CCEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEECCCCCHHCCHHHHCEE
ILKNNDESILFSQNFAEGGGAIASTSCNLTASHPITFSENTSGNLGGGAIYLSGPKPKLY
EEECCCCEEEEECCCCCCCCEEEECCCCEEECCCEEECCCCCCCCCCEEEEECCCCCEEE
LHAQNADIVFVGNLAHIVTKHVSTTNNNAITIKGAPELIRLIANENHSIIFYDPVLATAQ
EEECCCCEEEECCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCEEEECCCEEECC
STNPININSIDNIFHCGSVIFSGEKIEINRQDKSNMTSICNQPVYLNNGTLSITSGAILA
CCCCEECCCCHHHHHCCCEEECCCEEEECCCCCCCHHHHHCCCEEEECCEEEEECCEEEE
VQEFQQLGGVLNLSPGSMLTSYNSTGQDMIISNLSFGLDAARSHLPAEICATGNSEIKLS
HHHHHHHCCEEEECCCCEEEECCCCCCEEEEECCCCCHHHHHHCCCEEEEECCCCEEEEC
GSPQIHDPDNIFYDNHNLASQPYRMEIIFKSDKNINTEEFVPEEIAVHQNTHGYQGVWKF
CCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCHHHCCCCHHEEECCCCCCCCEEEE
HWSGEESKKRKVLRALWIPTGTFILNPEKEGHLVPSSVWTTFAGMRSSNDAILDNYLNNN
EECCCHHHHHHHHHHEECCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCC
TLLPIKHMCIFGGVVSSVMEQTSDNPNNFSSTQAGHNLGMKLPLSSNTVVCATFTQLHGS
EEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCC
SSQDNIPGKSHSHMLLGTVAAFKNWRALSLRSSISYAEESHVMKHQFSKKDITRGSWKNQ
CCCCCCCCCCCCEEEEEEHHHHCCCEEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
GFRSTVGLSYAYPKGIRCLKITPFVDLEYTVVNQNPFIETGYDPRYFASSRLSNLALPTG
CCCEECCEEECCCCCCEEEEECCEEEEEEEEECCCCCEECCCCCCHHHHHHHCCCCCCCC
VSLELRCFGAKYSLFTQFSMAYIKDLHRENPETTASLILNQHSWKVAGVFMGQEAMNLKF
CEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEHEEEECCCCEEEEEEECCHHHCEEE
RATLKYRLATAYLGISTIQREGNNLSGDAFGGLSLSF
EEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362; 10839753 [H]