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The map label for this gene is nrdR [H]

Identifier: 89898602

GI number: 89898602

Start: 937477

End: 937935

Strand: Direct

Name: nrdR [H]

Synonym: CF0795

Alternate gene names: 89898602

Gene position: 937477-937935 (Clockwise)

Preceding gene: 89898594

Following gene: 89898603

Centisome position: 80.38

GC content: 40.96

Gene sequence:

>459_bases
GTGCAGTGTCCTTTTTGCAATCATGGGGAACTAAAGGTTATAGATTCGAGAAATGCGCCAGAAGCAAATGCGATTAAACG
CCGAAGAGAGTGTTTAAATTGCGGACAAAGGTTCACCACGTTTGAAACTGTTGAGCTAACTCTGCAAGTATTAAAGCGGG
ATGGTCGTTACGAAAACTTCCAAGAATCTAAGCTAATTAACGGATTGAATGCCGCTTCCAGTCACACACGTATAGGACAA
GATCAAGTGCACGCGATAGCGTCTAACGTGAAATCAGAACTCCTTGGCAAACAAAATAGGGAAATCTCTACCAAAGAAAT
TGGCGAACTAGTAATGAAATATCTAAAAAAGGCAGACATGATTGCCTACATTAGATTTGCCTGCGTCTATAGAAGATTTA
AAGATGTTGGCGAGTTAATGGAGGTTCTGCTATCTGCAACTCCGGATATGGAAAAATAG

Upstream 100 bases:

>100_bases
ACAGATTGGAAAAAAAAATTTGCAACTTTAGTCGCATAGATTTATCCTGCGTTAAAATTATTACTTTCTTAGACTACCTT
AACCTTAGGAGGTAGCTCAC

Downstream 100 bases:

>100_bases
TGTATATTTTAAGGTTAAGGAGAAAACTATGCCGTTGTCTGAGGAAGAAATAGCCAATTTTAAACACAGACTTCTAGAAA
TGAAACATAAGTTGTCCCAT

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLNCGQRFTTFETVELTLQVLKRDGRYENFQESKLINGLNAASSHTRIGQ
DQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADMIAYIRFACVYRRFKDVGELMEVLLSATPDMEK

Sequences:

>Translated_152_residues
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLNCGQRFTTFETVELTLQVLKRDGRYENFQESKLINGLNAASSHTRIGQ
DQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADMIAYIRFACVYRRFKDVGELMEVLLSATPDMEK
>Mature_152_residues
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLNCGQRFTTFETVELTLQVLKRDGRYENFQESKLINGLNAASSHTRIGQ
DQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADMIAYIRFACVYRRFKDVGELMEVLLSATPDMEK

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=142, Percent_Identity=45.7746478873239, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 17400; Mature: 17400

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLNCGQRFTTFETVELTLQVLKRDGRYENF
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH
QESKLINGLNAASSHTRIGQDQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADM
HHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IAYIRFACVYRRFKDVGELMEVLLSATPDMEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLNCGQRFTTFETVELTLQVLKRDGRYENF
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH
QESKLINGLNAASSHTRIGQDQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADM
HHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IAYIRFACVYRRFKDVGELMEVLLSATPDMEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA