Click here to switch to the map view.

The map label for this gene is ebp12

Identifier: 89898594

GI number: 89898594

Start: 929061

End: 929825

Strand: Direct

Name: ebp12

Synonym: CF0787

Alternate gene names: NA

Gene position: 929061-929825 (Clockwise)

Preceding gene: 89898592

Following gene: 89898602

Centisome position: 79.66

GC content: 41.96

Gene sequence:

>765_bases
ATGCATGAAGCCCTCCAGAGCATTTTAGCCATTCAAGAGCTCGATATTAAAATGATTCGCTTGATGCGCGTCAAGAAAGA
GCATCAGAAAGAGCTCGCTAAGGTCCAATCTCTTAAATCTGACATTCGTCGCAAAGTTCAGGAGAAAGAGTTGGAGATGG
AAAACCTAAAGAATCAGATTAAAGAAGGCGAGAATCGGATTCAAGAGATTTCTGATCAAATTAACAAATTAGAAGGTCAA
CAAGCGGCTGTGAAAAAAATGGATGAGTTTAACGCTCTCACCCAAGAAATGACAGCTGCGAATAAAGAGCGCCGCGCGTT
AGAACACCAACTGAGTGATCTCATGGACAAGCAGGCGGGAAGTGAAGATCTGATTGTTTCTTTAAAAGAAAGCCTCACGT
CTACAGAAAATAGTAGTTTCGCTATTGAAAAAGAAATCTGCGAAAGCATTAAGAAGATTAATGAAGAAGGCAGGGCCCTA
CTACAACAACGTAGCGAACTCAAAGAGACCACAGATCCGGAAATGTTTCTTATTTATGAACGTCTATTAAACAACAAAAA
AGATCGTGTTGTTGTGCCTATAGAGAACCGTGTTTGTAGTGGCTGCCATATAGTTTTAACCCCCCAGCATGAAAATCTTG
TCCGTAAGAAAGACCGCCTGATTTTCTGCGAGCATTGTTCGAGAATTTTGTATTGGCGAGAACCCGACGCTCTTGCATCA
GACAGTTCTGCTGCAAAACGTCGTCGAAGACGCTCTGCTGTATAA

Upstream 100 bases:

>100_bases
AGCAGTAAACTTGCTTTCTTCTTCAGATGTATTCATTCCTAAATTTCATGATTTCGCATCCGTATTTAGGAACCACTAAG
CCAAGCAAGGAATAGTTTTC

Downstream 100 bases:

>100_bases
TAAGTTTTGTCGGAAGAGAAAGGCAACCGCTTCCTGTATCTCTAGTAGATATGGTAAGAGGAAAGTCTGGACTTCATAAG
AAGAGATACTGGAGAAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MHEALQSILAIQELDIKMIRLMRVKKEHQKELAKVQSLKSDIRRKVQEKELEMENLKNQIKEGENRIQEISDQINKLEGQ
QAAVKKMDEFNALTQEMTAANKERRALEHQLSDLMDKQAGSEDLIVSLKESLTSTENSSFAIEKEICESIKKINEEGRAL
LQQRSELKETTDPEMFLIYERLLNNKKDRVVVPIENRVCSGCHIVLTPQHENLVRKKDRLIFCEHCSRILYWREPDALAS
DSSAAKRRRRRSAV

Sequences:

>Translated_254_residues
MHEALQSILAIQELDIKMIRLMRVKKEHQKELAKVQSLKSDIRRKVQEKELEMENLKNQIKEGENRIQEISDQINKLEGQ
QAAVKKMDEFNALTQEMTAANKERRALEHQLSDLMDKQAGSEDLIVSLKESLTSTENSSFAIEKEICESIKKINEEGRAL
LQQRSELKETTDPEMFLIYERLLNNKKDRVVVPIENRVCSGCHIVLTPQHENLVRKKDRLIFCEHCSRILYWREPDALAS
DSSAAKRRRRRSAV
>Mature_254_residues
MHEALQSILAIQELDIKMIRLMRVKKEHQKELAKVQSLKSDIRRKVQEKELEMENLKNQIKEGENRIQEISDQINKLEGQ
QAAVKKMDEFNALTQEMTAANKERRALEHQLSDLMDKQAGSEDLIVSLKESLTSTENSSFAIEKEICESIKKINEEGRAL
LQQRSELKETTDPEMFLIYERLLNNKKDRVVVPIENRVCSGCHIVLTPQHENLVRKKDRLIFCEHCSRILYWREPDALAS
DSSAAKRRRRRSAV

Specific function: Unknown

COG id: COG1579

COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29563; Mature: 29563

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEALQSILAIQELDIKMIRLMRVKKEHQKELAKVQSLKSDIRRKVQEKELEMENLKNQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEGENRIQEISDQINKLEGQQAAVKKMDEFNALTQEMTAANKERRALEHQLSDLMDKQAG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEDLIVSLKESLTSTENSSFAIEKEICESIKKINEEGRALLQQRSELKETTDPEMFLIYE
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RLLNNKKDRVVVPIENRVCSGCHIVLTPQHENLVRKKDRLIFCEHCSRILYWREPDALAS
HHHCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHEEECCCCCCCC
DSSAAKRRRRRSAV
CHHHHHHHHHHCCC
>Mature Secondary Structure
MHEALQSILAIQELDIKMIRLMRVKKEHQKELAKVQSLKSDIRRKVQEKELEMENLKNQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEGENRIQEISDQINKLEGQQAAVKKMDEFNALTQEMTAANKERRALEHQLSDLMDKQAG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEDLIVSLKESLTSTENSSFAIEKEICESIKKINEEGRALLQQRSELKETTDPEMFLIYE
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RLLNNKKDRVVVPIENRVCSGCHIVLTPQHENLVRKKDRLIFCEHCSRILYWREPDALAS
HHHCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHEEECCCCCCCC
DSSAAKRRRRRSAV
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA