| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is 89898433
Identifier: 89898433
GI number: 89898433
Start: 730058
End: 730720
Strand: Direct
Name: 89898433
Synonym: CF0626
Alternate gene names: NA
Gene position: 730058-730720 (Clockwise)
Preceding gene: 89898432
Following gene: 89898444
Centisome position: 62.6
GC content: 38.46
Gene sequence:
>663_bases ATGCCGAATACACTGTCTAACTATCTCTGCAAACTTCTTCTTGTCCTAGCTGATATAAATGAAGCAAAATCTCTAATCCA GGACTTTACCTTCTCTCAGACTGCGAATAATTTCTATCAATGTCGGGATTCTCATATGTCCATAGCTATGGATATGATCA TTCTTGATCAATGGGGAGAAAATGGCGTCTTACAGGCATTAGAAAATATTAAACTAGAAAATTATGATTCCTGCGTGAAC ATTGGTTTTGCAGGAACCTGTTCTCCTCATCTTCCTTTACAAACCTGTTATACTATCGATAAGGTATCTCTATTTCGCGA AGACTCCCCCACACTTTGCAACTTGACAGAGGAAACATCAGAACTCACAATTACCACTATTCCTAATCTTCTGCAAGCCA ACTTAGTTTCTGTTCGTGCTCCATACAGACAGGGATTTCATGATACACTCCAGCTTGTGGATATGGAGGGGTATTCTATT GCCAAGTTATGCAAACATCATAATCTACGTTGTATGATGATTAAAATTGCTTCCGATTACACTACGAAAGAGGGCGGAGA CTATCTTAACCAGCATAAGAGCGTGTTGGCTAAAAAGTTATCTTCTGCGTTTAGTTCTTCCTTCTATAATATTATAGAAA GCTCTATCCCAAGCCAAATCTAA
Upstream 100 bases:
>100_bases AATGCTGAGGTCATTCGAAAGTTTATTTCCACCTATGTTAATGATGAAACTCTTGCATTATCTCATGCTGGGAAACAATC TCTTTACACACTATCAAATT
Downstream 100 bases:
>100_bases TCCCTAACTAATAGCAAGAGGTGGAACTAACTCTGAATTTGCAGACGAAGAAACTTCCCAATCTTTAGTTCCTGATAATT CCCACATTTTTAAAAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPNTLSNYLCKLLLVLADINEAKSLIQDFTFSQTANNFYQCRDSHMSIAMDMIILDQWGENGVLQALENIKLENYDSCVN IGFAGTCSPHLPLQTCYTIDKVSLFREDSPTLCNLTEETSELTITTIPNLLQANLVSVRAPYRQGFHDTLQLVDMEGYSI AKLCKHHNLRCMMIKIASDYTTKEGGDYLNQHKSVLAKKLSSAFSSSFYNIIESSIPSQI
Sequences:
>Translated_220_residues MPNTLSNYLCKLLLVLADINEAKSLIQDFTFSQTANNFYQCRDSHMSIAMDMIILDQWGENGVLQALENIKLENYDSCVN IGFAGTCSPHLPLQTCYTIDKVSLFREDSPTLCNLTEETSELTITTIPNLLQANLVSVRAPYRQGFHDTLQLVDMEGYSI AKLCKHHNLRCMMIKIASDYTTKEGGDYLNQHKSVLAKKLSSAFSSSFYNIIESSIPSQI >Mature_219_residues PNTLSNYLCKLLLVLADINEAKSLIQDFTFSQTANNFYQCRDSHMSIAMDMIILDQWGENGVLQALENIKLENYDSCVNI GFAGTCSPHLPLQTCYTIDKVSLFREDSPTLCNLTEETSELTITTIPNLLQANLVSVRAPYRQGFHDTLQLVDMEGYSIA KLCKHHNLRCMMIKIASDYTTKEGGDYLNQHKSVLAKKLSSAFSSSFYNIIESSIPSQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24724; Mature: 24592
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTLSNYLCKLLLVLADINEAKSLIQDFTFSQTANNFYQCRDSHMSIAMDMIILDQWGE CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC NGVLQALENIKLENYDSCVNIGFAGTCSPHLPLQTCYTIDKVSLFREDSPTLCNLTEETS CHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCC ELTITTIPNLLQANLVSVRAPYRQGFHDTLQLVDMEGYSIAKLCKHHNLRCMMIKIASDY CEEEEHHHHHHHHHHHHHHCHHHHCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCC TTKEGGDYLNQHKSVLAKKLSSAFSSSFYNIIESSIPSQI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PNTLSNYLCKLLLVLADINEAKSLIQDFTFSQTANNFYQCRDSHMSIAMDMIILDQWGE CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC NGVLQALENIKLENYDSCVNIGFAGTCSPHLPLQTCYTIDKVSLFREDSPTLCNLTEETS CHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCC ELTITTIPNLLQANLVSVRAPYRQGFHDTLQLVDMEGYSIAKLCKHHNLRCMMIKIASDY CEEEEHHHHHHHHHHHHHHCHHHHCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCC TTKEGGDYLNQHKSVLAKKLSSAFSSSFYNIIESSIPSQI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA