| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is 89898216
Identifier: 89898216
GI number: 89898216
Start: 485213
End: 485905
Strand: Direct
Name: 89898216
Synonym: CF0409
Alternate gene names: NA
Gene position: 485213-485905 (Clockwise)
Preceding gene: 89898199
Following gene: 89898217
Centisome position: 41.6
GC content: 38.1
Gene sequence:
>693_bases ATGCTTTCAAAATTAAGTAAGTTCCTATTAACCGTATTAATATCTATTCAGTCCCTAACGCCAGCTTCATTAGTCGCAGG GGAAACAAAGTCTGGTTTTTTCTCTAAGATGAAAAATTGGTTCTCCAGCAATGGGATGGGGGGGAATGACGTATCTGTTT CCAAGATTAAAGATAGCCTAAAGTGGAAACGGTATGACTACACAAAAAATTGTGGGTTTTCTGCGGAATTTCCTGGGGAT CCAGACCATTCGGGTCAGATCATAGAGATTCCTCAATCCGAACTTACTATACGTTACGATACATACGTTACAGAAACACA GTCGGACAATACTGTTTATGTGGTGTCTGTTTGGGAGTATCCTGAAAAGGTAGACGTTAGTCGTCCAGAATTAAATCTTC AGGAAGGATTTTCAGGAATGTTACAAGCTCTTCCGGAATCCCAGGTTCTATTTATGCAAGCAAAAGAGCTGCAGGGGTAT AAAGCTTTAGAATTTTGGATTTCCTGTGAGGATATTTATTTTCGAGGAATGTTGGTTTCAGTAAACCATACATTGTATCA AGTGTTTATGGTGTATAAAAACAAAGATGCCAAAGCTTTGGATAAAGAATATGAAACGTTTACGAAATCGTTTAGGATTA CCAAAGTTCGTGAGGCTAGAGCTATCGATTTAAAAAAGAAAGTCAGACTTTGA
Upstream 100 bases:
>100_bases ACACAAGGTTTTTTGGTGATTTTGATTTTTTGCGTTTTATTTATAATAAAAAGTCGAAGAAGTTATATCATTAAATTAAT AAACGTATTTTATTTTTATT
Downstream 100 bases:
>100_bases AAATGAGTATTTCTCTTGAGTTATGAATAAAAGTTCATAGAAGAGCTGCTCTTTCGGGTCTAGTTTTTCGCTACCTCTAG AGTCGAAAGAGCTATCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MLSKLSKFLLTVLISIQSLTPASLVAGETKSGFFSKMKNWFSSNGMGGNDVSVSKIKDSLKWKRYDYTKNCGFSAEFPGD PDHSGQIIEIPQSELTIRYDTYVTETQSDNTVYVVSVWEYPEKVDVSRPELNLQEGFSGMLQALPESQVLFMQAKELQGY KALEFWISCEDIYFRGMLVSVNHTLYQVFMVYKNKDAKALDKEYETFTKSFRITKVREARAIDLKKKVRL
Sequences:
>Translated_230_residues MLSKLSKFLLTVLISIQSLTPASLVAGETKSGFFSKMKNWFSSNGMGGNDVSVSKIKDSLKWKRYDYTKNCGFSAEFPGD PDHSGQIIEIPQSELTIRYDTYVTETQSDNTVYVVSVWEYPEKVDVSRPELNLQEGFSGMLQALPESQVLFMQAKELQGY KALEFWISCEDIYFRGMLVSVNHTLYQVFMVYKNKDAKALDKEYETFTKSFRITKVREARAIDLKKKVRL >Mature_230_residues MLSKLSKFLLTVLISIQSLTPASLVAGETKSGFFSKMKNWFSSNGMGGNDVSVSKIKDSLKWKRYDYTKNCGFSAEFPGD PDHSGQIIEIPQSELTIRYDTYVTETQSDNTVYVVSVWEYPEKVDVSRPELNLQEGFSGMLQALPESQVLFMQAKELQGY KALEFWISCEDIYFRGMLVSVNHTLYQVFMVYKNKDAKALDKEYETFTKSFRITKVREARAIDLKKKVRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26379; Mature: 26379
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKLSKFLLTVLISIQSLTPASLVAGETKSGFFSKMKNWFSSNGMGGNDVSVSKIKDSL CHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH KWKRYDYTKNCGFSAEFPGDPDHSGQIIEIPQSELTIRYDTYVTETQSDNTVYVVSVWEY HHEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEEECC PEKVDVSRPELNLQEGFSGMLQALPESQVLFMQAKELQGYKALEFWISCEDIYFRGMLVS CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCCEEEEEEEEECCEEEEEEEEE VNHTLYQVFMVYKNKDAKALDKEYETFTKSFRITKVREARAIDLKKKVRL EHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHCHHHHCCC >Mature Secondary Structure MLSKLSKFLLTVLISIQSLTPASLVAGETKSGFFSKMKNWFSSNGMGGNDVSVSKIKDSL CHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH KWKRYDYTKNCGFSAEFPGDPDHSGQIIEIPQSELTIRYDTYVTETQSDNTVYVVSVWEY HHEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEEECC PEKVDVSRPELNLQEGFSGMLQALPESQVLFMQAKELQGYKALEFWISCEDIYFRGMLVS CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCCEEEEEEEEECCEEEEEEEEE VNHTLYQVFMVYKNKDAKALDKEYETFTKSFRITKVREARAIDLKKKVRL EHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA