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The map label for this gene is nusG [H]

Identifier: 89898122

GI number: 89898122

Start: 361393

End: 361941

Strand: Direct

Name: nusG [H]

Synonym: CF0315

Alternate gene names: 89898122

Gene position: 361393-361941 (Clockwise)

Preceding gene: 89898121

Following gene: 89898123

Centisome position: 30.99

GC content: 36.25

Gene sequence:

>549_bases
ATGTTTAAATGGTATGTCGTTCAAGTTTTTACGGCTCAAGAGAAAACAGTTAAAAAAGCTTTAGAAGATTTTAAAGAATC
TTCTGGAATGACGGATTTTATACAAGAGATTGTCTTGCCTATAGAAAACGTTATGGAAGTAAAAAGAGGTGAACATAAAA
TCGTTGAGAAGTTCATCTGGCCGGGATACTTGTTAATCAAAATGCATCTTACAGATGAGTCTTGGCTATACGTAAAAAAT
AATCCCGGTGTTGTTGAATTTTTAGGTGGAGGAGTTCCTCTAGCCTTATCTGAAGATGAAGTAAGAAATATTTTAAAGGA
TATCGAAGAGAAGAAAGCGGGAGTTGTTCAAAAACATAAATTTGACATTGGGTCTAGAGTCAAAATTAATGATGGCGTTT
TTGTAAACTTTATCGGTGTTGTTTCTGAGGTTTTCCATGACAAAGGGCGTCTCAGTGTCATGGTATCCATCTTTGGAAGG
GAAACTCGTGTTGATGATTTAGAGTTTTGGCAGGTAGAAGAGGTGGCTCCGGAACAAGAAAGTGAATAA

Upstream 100 bases:

>100_bases
ATTTTTGGCTTGGGTTTTTCTATATATTGTGTGGATTTGGTGTTTCGTAAGTTACTTACACTGTTAAGTAGTATAACAAG
CTTTTTGTTTGGTTAGTTGC

Downstream 100 bases:

>100_bases
GAGTAAGAAAATCTGTGTATTCTTATTCTCCATCTTCTTATAATTTTAGTTTTTCGTTTCCTCCTCGTTATTCGTAGAGG
GGTGTCAAGATAGAGTAAGG

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MFKWYVVQVFTAQEKTVKKALEDFKESSGMTDFIQEIVLPIENVMEVKRGEHKIVEKFIWPGYLLIKMHLTDESWLYVKN
NPGVVEFLGGGVPLALSEDEVRNILKDIEEKKAGVVQKHKFDIGSRVKINDGVFVNFIGVVSEVFHDKGRLSVMVSIFGR
ETRVDDLEFWQVEEVAPEQESE

Sequences:

>Translated_182_residues
MFKWYVVQVFTAQEKTVKKALEDFKESSGMTDFIQEIVLPIENVMEVKRGEHKIVEKFIWPGYLLIKMHLTDESWLYVKN
NPGVVEFLGGGVPLALSEDEVRNILKDIEEKKAGVVQKHKFDIGSRVKINDGVFVNFIGVVSEVFHDKGRLSVMVSIFGR
ETRVDDLEFWQVEEVAPEQESE
>Mature_182_residues
MFKWYVVQVFTAQEKTVKKALEDFKESSGMTDFIQEIVLPIENVMEVKRGEHKIVEKFIWPGYLLIKMHLTDESWLYVKN
NPGVVEFLGGGVPLALSEDEVRNILKDIEEKKAGVVQKHKFDIGSRVKINDGVFVNFIGVVSEVFHDKGRLSVMVSIFGR
ETRVDDLEFWQVEEVAPEQESE

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=175, Percent_Identity=38.8571428571429, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20949; Mature: 20949

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKWYVVQVFTAQEKTVKKALEDFKESSGMTDFIQEIVLPIENVMEVKRGEHKIVEKFIW
CCEEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PGYLLIKMHLTDESWLYVKNNPGVVEFLGGGVPLALSEDEVRNILKDIEEKKAGVVQKHK
CCEEEEEEEECCCCEEEEECCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHCCCHHHCC
FDIGSRVKINDGVFVNFIGVVSEVFHDKGRLSVMVSIFGRETRVDDLEFWQVEEVAPEQE
CCCCCEEEECCCEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHEEHHHCCCCCC
SE
CC
>Mature Secondary Structure
MFKWYVVQVFTAQEKTVKKALEDFKESSGMTDFIQEIVLPIENVMEVKRGEHKIVEKFIW
CCEEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PGYLLIKMHLTDESWLYVKNNPGVVEFLGGGVPLALSEDEVRNILKDIEEKKAGVVQKHK
CCEEEEEEEECCCCEEEEECCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHCCCHHHCC
FDIGSRVKINDGVFVNFIGVVSEVFHDKGRLSVMVSIFGRETRVDDLEFWQVEEVAPEQE
CCCCCEEEECCCEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHEEHHHCCCCCC
SE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10871362; 10684935 [H]