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The map label for this gene is nlpD

Identifier: 89897957

GI number: 89897957

Start: 181997

End: 182725

Strand: Direct

Name: nlpD

Synonym: CF0150

Alternate gene names: NA

Gene position: 181997-182725 (Clockwise)

Preceding gene: 89897956

Following gene: 89897958

Centisome position: 15.61

GC content: 41.02

Gene sequence:

>729_bases
ATGAACCGTAGAGATACGATTATAATCGCAACTTTAGTAAATGTTGTTTTGGTTCTGGTACTCTTTACCACAGCAAAACA
GGCAGATAAGAAAAATGCGGATGTATTACTTCCTCCTTTGCCAACGAAGCTTGTTGAGGTTGTTCCCCCCTCAGTAGAAA
AAGTACAAGAGAAAGTCGAAAAGGTTGAAAAACCTGTTATAGAATCTGTCCCTCAACGTGTTTCCAAAGAAGAAATGGCA
GCGCAATTTTCAGAAAATAAACCCGTAGTTGTTAAGGCGTCTCCTGCCCCTACTATTCCTCAAATAACTGCTCCTGTTCC
CGTTGCCAACCCTGCACCTGCTGAACCAAAAGTCCAAGTGGCTAAAGAAACTCCTAAAAAAGAAGGATACGCAACTGTTA
TCGTGAAAAAGGGAGATTTCTTAGAACGTATTGCTAAGGCAAATCATACGACCGTAGCTGTACTTATGCAGATCAATGAC
CTATCTTCCACTCAGTTAAAGATAGGGCAAATATTGAGAGTTCCCGTGTCTGATAAGCAAGAAGAAACTAAGAATCCTCA
GGTGAAGGTTGCAAAGCCTGAAGATTTCTATACTGTCCAAGAAGGAGATAGCCCTTGGACTATAGCTTTGCGTAATCATA
TCCGTCTCGAAGATTTGTTGAAAATGAATGATCTTGACGAACAAAAAGCGCGTAAACTAAGACCAGGAGATCAGTTACGT
ATTCGGTAG

Upstream 100 bases:

>100_bases
TATTATCTCCTGGATGTGCAAGTTTTGACCAGTTTCGAAGCTTTGAGGAACGAGGGGATTGCTTTAGGCAATTGGTTGGA
GATATGGAGGCGTTAAAGAT

Downstream 100 bases:

>100_bases
TTTTCTCCTAGGCCCAATATGAAGTGGTTTATTGTTTCATGTTTACTAGGGATCTTTTCTCTGGGTCTAGTTATGGTTTT
CGATACTTCCTCTGCAGAAA

Product: cell wall binding muramidase

Products: NA

Alternate protein names: LysM Domain-Containing Protein; Peptidase M; Muropeptidase; Cell Wall Hydrolase

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNRRDTIIIATLVNVVLVLVLFTTAKQADKKNADVLLPPLPTKLVEVVPPSVEKVQEKVEKVEKPVIESVPQRVSKEEMA
AQFSENKPVVVKASPAPTIPQITAPVPVANPAPAEPKVQVAKETPKKEGYATVIVKKGDFLERIAKANHTTVAVLMQIND
LSSTQLKIGQILRVPVSDKQEETKNPQVKVAKPEDFYTVQEGDSPWTIALRNHIRLEDLLKMNDLDEQKARKLRPGDQLR
IR

Sequences:

>Translated_242_residues
MNRRDTIIIATLVNVVLVLVLFTTAKQADKKNADVLLPPLPTKLVEVVPPSVEKVQEKVEKVEKPVIESVPQRVSKEEMA
AQFSENKPVVVKASPAPTIPQITAPVPVANPAPAEPKVQVAKETPKKEGYATVIVKKGDFLERIAKANHTTVAVLMQIND
LSSTQLKIGQILRVPVSDKQEETKNPQVKVAKPEDFYTVQEGDSPWTIALRNHIRLEDLLKMNDLDEQKARKLRPGDQLR
IR
>Mature_242_residues
MNRRDTIIIATLVNVVLVLVLFTTAKQADKKNADVLLPPLPTKLVEVVPPSVEKVQEKVEKVEKPVIESVPQRVSKEEMA
AQFSENKPVVVKASPAPTIPQITAPVPVANPAPAEPKVQVAKETPKKEGYATVIVKKGDFLERIAKANHTTVAVLMQIND
LSSTQLKIGQILRVPVSDKQEETKNPQVKVAKPEDFYTVQEGDSPWTIALRNHIRLEDLLKMNDLDEQKARKLRPGDQLR
IR

Specific function: Unknown

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26902; Mature: 26902

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRDTIIIATLVNVVLVLVLFTTAKQADKKNADVLLPPLPTKLVEVVPPSVEKVQEKVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCHHHHHHHHH
KVEKPVIESVPQRVSKEEMAAQFSENKPVVVKASPAPTIPQITAPVPVANPAPAEPKVQV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEH
AKETPKKEGYATVIVKKGDFLERIAKANHTTVAVLMQINDLSSTQLKIGQILRVPVSDKQ
HHCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCEEECCCCCCH
EETKNPQVKVAKPEDFYTVQEGDSPWTIALRNHIRLEDLLKMNDLDEQKARKLRPGDQLR
HHCCCCCEEEECCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCCCEE
IR
EC
>Mature Secondary Structure
MNRRDTIIIATLVNVVLVLVLFTTAKQADKKNADVLLPPLPTKLVEVVPPSVEKVQEKVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCHHHHHHHHH
KVEKPVIESVPQRVSKEEMAAQFSENKPVVVKASPAPTIPQITAPVPVANPAPAEPKVQV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEH
AKETPKKEGYATVIVKKGDFLERIAKANHTTVAVLMQINDLSSTQLKIGQILRVPVSDKQ
HHCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCEEECCCCCCH
EETKNPQVKVAKPEDFYTVQEGDSPWTIALRNHIRLEDLLKMNDLDEQKARKLRPGDQLR
HHCCCCCEEEECCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHCCCCCCEE
IR
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA